RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 DMAP1Q9NPF5 467 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-201ENST00000285398 PXMP2Q9NR77 195 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 CPA4Q9UI42 421 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 TELO2Q9Y4R8 837 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
ERCC3-201ENST00000285398 GH1P01241 217 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 OSBPP22059 807 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 CTNNA2P26232 953 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.62
ERCC3-201ENST00000285398 SPDYAQ5MJ70 313 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 RGMBQ6NW40 437 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 PRELID2Q8N945 189 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 PDCD2LQ9BRP1 358 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 CDC42EP4Q9H3Q1 356 aaKnown RBP11.15□□□□□ -0.62
ERCC3-201ENST00000285398 NMRK1Q9NWW6 199 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 TRAF3IP3Q9Y228 551 aa11.15□□□□□ -0.62
ERCC3-201ENST00000285398 MAGEA13PA6NCF6 341 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 TRAFD1O14545 582 aaPredicted RBP11.15□□□□□ -0.63
ERCC3-201ENST00000285398 HNRNPCL1O60812 293 aaKnown RBP11.15□□□□□ -0.63
ERCC3-201ENST00000285398 ACSL3O95573 720 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 PLA2G4BP0C869 781 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 YY1P25490 414 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 OAZ1P54368 228 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 OCRLQ01968 901 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 RCN2Q14257 317 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 ZNF568Q3ZCX4 644 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 GPBP1Q86WP2 473 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 CCDC105Q8IYK2 499 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 ARHGAP18Q8N392 663 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 ZNF784Q8NCA9 323 aaPredicted RBP11.15□□□□□ -0.63
ERCC3-201ENST00000285398 ALG3Q92685 438 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 KCNH7Q9NS40 1196 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 PCMTD2Q9NV79 361 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 PDP2Q9P2J9 529 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 MTUS1Q9ULD2 1270 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 IGSF9BQ9UPX0 1349 aa11.15□□□□□ -0.63
ERCC3-201ENST00000285398 NPHP3-ACAD11A0A0J9YXS1 232 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 EML1O00423 815 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 MEIS1O00470 390 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 ATP2A1O14983 1001 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 CREB3O43889 395 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 ATP9AO75110 1047 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 ENTPD5O75356 428 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 NR3C2P08235 984 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 CYP11B2P19099 503 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 TAC1P20366 129 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 ABCB4P21439 1286 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 MARK3P27448 753 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 EPHB2P29323 1055 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 TMCO4Q5TGY1 634 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 SMC1BQ8NDV3 1235 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 ATL2Q8NHH9 583 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 GBP5Q96PP8 586 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 TIPINQ9BVW5 301 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 VCX3BQ9H321 246 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 DENND2DQ9H6A0 471 aaPredicted RBP11.14□□□□□ -0.63
ERCC3-201ENST00000285398 VCX3AQ9NNX9 186 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 CHKBQ9Y259 395 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 ACTL7BQ9Y614 415 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 CYP3A7-CYP3A51PA0A087WV96 503 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 E9PMD0 336 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 TCEA3O75764 348 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 FDX1P10109 184 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 CYP3A7P24462 503 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 PSMC4P43686 418 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
ERCC3-201ENST00000285398 MPP2Q14168 576 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 SEL1L2Q5TEA6 688 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 RIOX2Q8IUF8 465 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 GLYCTKQ8IVS8 523 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 ZNF513Q8N8E2 541 aaPredicted RBP11.14□□□□□ -0.63
ERCC3-201ENST00000285398 UCMAQ8WVF2 138 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 SLC7A6OSQ96CW6 309 aaPredicted RBP11.14□□□□□ -0.63
ERCC3-201ENST00000285398 METTL14Q9HCE5 456 aaKnown RBP11.14□□□□□ -0.63
ERCC3-201ENST00000285398 GCNT4Q9P109 453 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 MYPNQ86TC9 1320 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 ADGRA3Q8IWK6 1321 aa11.14□□□□□ -0.63
ERCC3-201ENST00000285398 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 GTPBP10A4D1E9 387 aaKnown RBP11.13□□□□□ -0.63
ERCC3-201ENST00000285398 ZBTB39O15060 712 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 RGS20O76081 388 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 CACNA2D1P54289 1103 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 DCAF17Q5H9S7 520 aaPredicted RBP11.13□□□□□ -0.63
ERCC3-201ENST00000285398 SNX30Q5VWJ9 437 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 ARMC3Q5W041 872 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 TTC27Q6P3X3 843 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 FAM47EQ6ZV65 393 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 ARMCX6Q7L4S7 300 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 TRIM74Q86UV6 250 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 TRIM73Q86UV7 250 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 RHOT2Q8IXI1 618 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 TTC8Q8TAM2 541 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 ZNF577Q9BSK1 485 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 SYT11Q9BT88 431 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 LOC285556D6RIA3 1793 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 A0A1B0GVG6 124 aa11.13□□□□□ -0.63
ERCC3-201ENST00000285398 UNCXA6NJT0 531 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms