RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 DEXIO95424 95 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 MTHFD1P11586 935 aaKnown RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 MCM3P25205 808 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 ADORA1P30542 326 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SCNN1BP51168 640 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 PNOCQ13519 176 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 CUL4AQ13619 759 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 ACVR2BQ13705 512 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 MYBPC3Q14896 1274 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 LETM2Q2VYF4 491 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 ADALQ6DHV7 355 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 GTF2IRD2BQ6EKJ0 949 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 CCBE1Q6UXH8 406 aaPredicted RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 GTF2IRD2Q86UP8 949 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 IGSF22Q8N9C0 903 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 LPIN2Q92539 896 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 NEIL1Q96FI4 390 aaPredicted RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 ZNF274Q96GC6 653 aaPredicted RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 CCDC42Q96M95 316 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 ALS2CR12Q96Q35 445 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SPAG5Q96R06 1193 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 UIMC1Q96RL1 719 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 WNT10AQ9GZT5 417 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 C6orf50Q9HD87 102 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 AATFQ9NY61 560 aaKnown RBP eCLIP3.15□□□□□ -1.91
HERC4-201ENST00000277817 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 NDOR1Q9UHB4 597 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 PCDHA7Q9UN72 937 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 NFE2L3Q9Y4A8 694 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 DAGLAQ9Y4D2 1042 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SAMM50Q9Y512 469 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 BACE2Q9Y5Z0 518 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 PGPEP1LA6NFU8 196 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 AKR1B15C9JRZ8 316 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 FOXN3O00409 490 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 PFKFB2O60825 505 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ECEL1O95672 775 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 HLA-DOAP06340 250 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 HIBADHP31937 336 aaKnown RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 CYLC1P35663 651 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 FLT3P36888 993 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 IL12RB1P42701 662 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 USP11P51784 963 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 NLRP12P59046 1061 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ATP11AP98196 1134 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 IFFO1Q0D2I5 559 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 SLBPQ14493 270 aaKnown RBP eCLIP3.14□□□□□ -1.91
HERC4-201ENST00000277817 TNIP1Q15025 636 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ZMYM1Q5SVZ6 1142 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 RASGRP2Q7LDG7 609 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 SESTD1Q86VW0 696 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 DENND1CQ8IV53 801 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 SYCP3Q8IZU3 236 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ITPKCQ96DU7 683 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 FBXL18Q96ME1 805 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TXLNGYQ9BZA5 131 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 FTOQ9C0B1 505 aaKnown RBP eCLIP3.14□□□□□ -1.91
HERC4-201ENST00000277817 ZC3H12CQ9C0D7 883 aaKnown RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 ABCG4Q9H172 646 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 ADAM7Q9H2U9 754 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 EPS8L2Q9H6S3 715 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 PKD2L1Q9P0L9 805 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 VPS54Q9P1Q0 977 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 WHRNQ9P202 907 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CGGBP1Q9UFW8 167 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 DENND2AQ9ULE3 1009 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 RTL9Q8NET4 1388 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TCRBV5S4A2TA0A5A2 114 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 UBE2CO00762 179 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 MSCO60682 206 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CUTAO60888 179 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 SKAP2O75563 359 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 CSPG5O95196 566 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 DNTTP04053 509 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 HSPA7P48741 367 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 NDUFA8P51970 172 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 KIF5AQ12840 1032 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 MTX1Q13505 466 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 FAM47AQ5JRC9 791 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 FAM182BQ5T319 152 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 NBPF12Q5TAG4 269 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 KRT79Q5XKE5 535 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 MOGAT3Q86VF5 341 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 LURAP1LQ8IV03 231 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CHCHD4Q8N4Q1 142 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CHST13Q8NET6 341 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CTNNBL1Q8WYA6 563 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 RRP36Q96EU6 259 aaKnown RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 WDR89Q96FK6 387 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 CLIC6Q96NY7 704 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 KATNAL1Q9BW62 490 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 FAM107BQ9H098 131 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 PRDM12Q9H4Q4 367 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CCDC86Q9H6F5 360 aaKnown RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 SMURF1Q9HCE7 757 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 CALCOCO1Q9P1Z2 691 aa3.14□□□□□ -1.91
HERC4-201ENST00000277817 TMEFF2Q9UIK5 374 aaPredicted RBP3.14□□□□□ -1.91
HERC4-201ENST00000277817 FHOD1Q9Y613 1164 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms