RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 RMDN1Q96DB5 314 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 ZFRQ96KR1 1074 aaKnown RBP14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 FAM192AQ9GZU8 254 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 PABPC3Q9H361 631 aaKnown RBP14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 E9PCH4 1651 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 PSMD3O43242 534 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 EIF2AK2P19525 551 aaKnown RBP14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 GALCP54803 685 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 NME3Q13232 169 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 RNF219Q5W0B1 726 aaPredicted RBP14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 SNRNP27Q8WVK2 155 aaKnown RBP14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 DPF2Q92785 391 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 TIPINQ9BVW5 301 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 TUFT1Q9NNX1 390 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 GRID1Q9ULK0 1009 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 ARAP3Q8WWN8 1544 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 TOMM70O94826 608 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 IMPDH2P12268 514 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 FNTAP49354 379 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 ITGA8P53708 1063 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 POLR3FQ9H1D9 316 aaPredicted RBP14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 TMEM161AQ9NX61 479 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 ZNF263O14978 683 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 RHOBTB3O94955 611 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 TCN1P20061 433 aaPredicted RBP14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 ARHGEF6Q15052 776 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 EIF2AK1Q9BQI3 630 aaKnown RBP14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 TMEM47Q9BQJ4 181 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 BBS2Q9BXC9 721 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 C2orf40Q9H1Z8 148 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 USE1Q9NZ43 259 aa14.27□□□□□ -0.13
NOTCH1-201ENST00000277541 GON4LQ3T8J9 2241 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 FXR1P51114 621 aaKnown RBP eCLIP14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 CHI3L2Q15782 390 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 DUOXA2Q1HG44 320 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 NAIF1Q69YI7 327 aaPredicted RBP14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 VPS33BQ9H267 617 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 TSPY1Q01534 308 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 DSTYKQ6XUX3 929 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 ZNF786Q8N393 782 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 FRMD8Q9BZ67 464 aaPredicted RBP14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 TASP1Q9H6P5 420 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 HMOX2P30519 316 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 TP53BP2Q13625 1128 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 WNK4Q96J92 1243 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 WHRNQ9P202 907 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP1O94782 785 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 POLBP06746 335 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 STAT3P40763 770 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 NUDT2P50583 147 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 HSD17B4P51659 736 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 INPP5DQ92835 1189 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 E2F7Q96AV8 911 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 KLHL25Q9H0H3 589 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 APBA3O96018 575 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 CYP26A1O43174 497 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 EDRF1Q3B7T1 1238 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 MICU2Q8IYU8 434 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 RMDN3Q96TC7 470 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 LBHD1Q9BQE6 289 aaPredicted RBP14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 ANKRD12Q6UB98 2062 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L15C9J2P7 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L13C9JLJ4 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L11C9JVI0 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L18D6R9N7 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L22D6RA61 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L17D6RBQ6 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L19D6RCP7 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L20D6RJB6 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 ATP6V1G2O95670 118 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 RECQLP46063 649 aaPredicted RBP14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L24Q0WX57 530 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 ERFEQ4G0M1 354 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 IYDQ6PHW0 289 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 USP17L6PQ6QN14 398 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 SPATA18Q8TC71 538 aa14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 SH3RF3Q8TEJ3 882 aaPredicted RBP14.26□□□□□ -0.13
NOTCH1-201ENST00000277541 UBA6A0AVT1 1052 aaPredicted RBP14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 KIAA0391O15091 583 aaKnown RBP14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 TRMT5Q32P41 509 aaKnown RBP14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 SPDYAQ5MJ70 313 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 MCEEQ96PE7 176 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 PNMA3Q9UL41 463 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 PLEKHG2Q9H7P9 1386 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 SPRP35270 261 aaPredicted RBP14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 RPS6P62753 249 aaKnown RBP14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 COQ7Q99807 217 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 RAB6BQ9NRW1 208 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 KLHL11Q9NVR0 708 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 PP2D1A8MPX8 630 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 RAD9BQ6WBX8 426 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 EFL1Q7Z2Z2 1120 aaKnown RBP14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 PPIL6Q8IXY8 311 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 OPTNQ96CV9 577 aa14.25□□□□□ -0.13
NOTCH1-201ENST00000277541 TUBE1Q9UJT0 475 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms