RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TRPM7Q96QT4 1865 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 A0A0U1RQG5 324 aaPredicted RBP10.22□□□□□ -0.77
TRIM55-201ENST00000276573 SMIM35A0A1B0GVV1 85 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 CCDC66A2RUB6 948 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 MBLAC1A4D2B0 266 aaPredicted RBP10.22□□□□□ -0.77
TRIM55-201ENST00000276573 ZSCAN5CA6NGD5 496 aaPredicted RBP10.22□□□□□ -0.77
TRIM55-201ENST00000276573 HAS3O00219 553 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 GPR32O75388 356 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 IGHA2P01877 340 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 KRT19P08727 400 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 FGFR4P22455 802 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 RGS2P41220 211 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 ASPAP45381 313 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 MARCKSL1P49006 195 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 CARSP49589 748 aaKnown RBP10.22□□□□□ -0.77
TRIM55-201ENST00000276573 EPHB4P54760 987 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 IRX5P78411 483 aaPredicted RBP10.22□□□□□ -0.77
TRIM55-201ENST00000276573 C1QBPQ07021 282 aaKnown RBP10.22□□□□□ -0.77
TRIM55-201ENST00000276573 GPS2Q13227 327 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 MFSD10Q14728 455 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 PPP2R5EQ16537 467 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 KIZQ2M2Z5 673 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF667Q5HYK9 610 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 TLK2Q86UE8 772 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 CCDC26Q8TAB7 109 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 CXorf38Q8TB03 319 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 CASKIN2Q8WXE0 1202 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 GDAP1L1Q96MZ0 367 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 ACAP3Q96P50 834 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 ADPGKQ9BRR6 497 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 GCOM2Q9BZD3 368 aaPredicted RBP10.22□□□□□ -0.77
TRIM55-201ENST00000276573 ACBD3Q9H3P7 528 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 PLEKHA4Q9H4M7 779 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 CDHR5Q9HBB8 845 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 NXF1Q9UBU9 619 aaKnown RBP10.22□□□□□ -0.77
TRIM55-201ENST00000276573 HPCAL4Q9UM19 191 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 POLIQ9UNA4 740 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 ANK1P16157 1881 aa10.22□□□□□ -0.77
TRIM55-201ENST00000276573 H3BQF6 201 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 MYO1FO00160 1098 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 PYGMP11217 842 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 OAS2P29728 719 aaKnown RBP10.21□□□□□ -0.77
TRIM55-201ENST00000276573 ATICP31939 592 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 GRM5P41594 1212 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 PSEN2P49810 448 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 ADAM17P78536 824 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 WDR72Q3MJ13 1102 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF394Q53GI3 561 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 C2CD6Q53TS8 623 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 PLEKHA7Q6IQ23 1121 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 AADACL2Q6P093 401 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 LLGL2Q6P1M3 1020 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 EMBQ6PCB8 327 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 SCARA5Q6ZMJ2 495 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 SND1Q7KZF4 910 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRIM55-201ENST00000276573 MAATS1Q7Z4T9 603 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 EIF1ADQ8N9N8 165 aaKnown RBP10.21□□□□□ -0.77
TRIM55-201ENST00000276573 PPP1R13LQ8WUF5 828 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 IFT81Q8WYA0 676 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 CAVIN3Q969G5 261 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 LENG1Q96BZ8 264 aaPredicted RBP10.21□□□□□ -0.77
TRIM55-201ENST00000276573 C11orf70Q9BRQ4 267 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 BCO2Q9BYV7 579 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 FAM49AQ9H0Q0 323 aaPredicted RBP10.21□□□□□ -0.77
TRIM55-201ENST00000276573 AP5M1Q9H0R1 490 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 NFU1Q9UMS0 254 aa10.21□□□□□ -0.77
TRIM55-201ENST00000276573 ESYT3A0FGR9 886 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 ITGB3P05106 788 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 MYL3P08590 195 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 CYP2C9P11712 490 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 HSPA6P17066 643 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 MMP8P22894 467 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 BRD2P25440 801 aaKnown RBP10.21□□□□□ -0.78
TRIM55-201ENST00000276573 HOXA11P31270 313 aaPredicted RBP10.21□□□□□ -0.78
TRIM55-201ENST00000276573 SLC1A1P43005 524 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 CPT1AP50416 773 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 RWDD2BP57060 319 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 TMEM62Q0P6H9 643 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 PAK2Q13177 524 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 NNTQ13423 1086 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 MAMLD1Q13495 774 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 HIC1Q14526 733 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 TMEM132DQ14C87 1099 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 TRADDQ15628 312 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 SEL1L2Q5TEA6 688 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 MMS22LQ6ZRQ5 1243 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 ADAT2Q7Z6V5 191 aaKnown RBP10.21□□□□□ -0.78
TRIM55-201ENST00000276573 NT5DC4Q86YG4 428 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 CD302Q8IX05 232 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 DOCK3Q8IZD9 2030 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 TMEM130Q8N3G9 435 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 WDTC1Q8N5D0 677 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 TMEM35BQ8NCS4 154 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 TFAP2BQ92481 460 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 TRIM7Q9C029 511 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 ZNF518BQ9C0D4 1074 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 SDCBP2Q9H190 292 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 VRTNQ9H8Y1 702 aa10.21□□□□□ -0.78
TRIM55-201ENST00000276573 MRPL47Q9HD33 250 aaKnown RBP10.21□□□□□ -0.78
TRIM55-201ENST00000276573 AMACRQ9UHK6 382 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms