RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TBC1D31Q96DN5 1066 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 TMEM237Q96Q45 408 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 WNT8AQ9H1J5 351 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 SEMA4AQ9H3S1 761 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 LRRC42Q9Y546 428 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 A0A1W2PQ45 241 aaPredicted RBP10.99□□□□□ -0.65
UPF3B-201ENST00000276201 A0A1W2PQY0 241 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 KCNJ2P63252 427 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 MYBPC2Q14324 1141 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 FSCN1Q16658 493 aaKnown RBP10.99□□□□□ -0.65
UPF3B-201ENST00000276201 LY6KQ17RY6 165 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 GNASQ5JWF2 1037 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 PCNX4Q63HM2 1172 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 SPATA21Q7Z572 469 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 OR6J1Q8NGC5 347 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 TMEM174Q8WUU8 243 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 CRYGNQ8WXF5 182 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 DPF3Q92784 378 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 KLHL29Q96CT2 875 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 ZSWIM1Q9BR11 485 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 GPR88Q9GZN0 384 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 TBC1D7Q9P0N9 293 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 USP20Q9Y2K6 914 aa10.99□□□□□ -0.65
UPF3B-201ENST00000276201 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ANKRD33BA6NCL7 494 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 MOXD2PA6NHM9 499 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 MED24O75448 989 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 KRT18P05783 430 aaKnown RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 RPSAP08865 295 aaKnown RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 PSMC2P35998 433 aaKnown RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 PEX5P50542 639 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ATN1P54259 1190 aaPredicted RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ATP11AP98196 1134 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 CAV1Q03135 178 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 AP3B2Q13367 1082 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 Q4G0T1 1027 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 FAM133BQ5BKY9 247 aaKnown RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 CAPRIN2Q6IMN6 1127 aaKnown RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 VSTM1Q6UX27 236 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ALG3Q92685 438 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 GLG1Q92896 1179 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 CD101Q93033 1021 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 MAGEB18Q96M61 343 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 LRRC19Q9H756 370 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 OSGEPQ9NPF4 335 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 TXLNGQ9NUQ3 528 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ADAM22Q9P0K1 906 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 MTUS1Q9ULD2 1270 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 IGSF9BQ9UPX0 1349 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 CEP290O15078 2479 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 NPHP3-ACAD11A0A0J9YXS1 232 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 MAGEB2O15479 319 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 MARCH6O60337 910 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ASGR1P07306 291 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ATP2A2P16615 1042 aaKnown RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 TNFAIP3P21580 790 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 COILP38432 576 aaPredicted RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 CASP5P51878 434 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 SLC18A1P54219 525 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 MCCD1P59942 119 aaPredicted RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ARHGAP1Q07960 439 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 XRRA1Q6P2D8 792 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 RHBDF2Q6PJF5 856 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 SFR1Q86XK3 245 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 RELL1Q8IUW5 271 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 AGGF1Q8N302 714 aaeCLIP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 PCSK9Q8NBP7 692 aaKnown RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ZNF483Q8TF39 744 aaPredicted RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 INPP5DQ92835 1189 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 FAM212AQ96EL1 285 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 SAAL1Q96ER3 474 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 THOC1Q96FV9 657 aaKnown RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 POLR3CQ9BUI4 534 aaPredicted RBP10.98□□□□□ -0.65
UPF3B-201ENST00000276201 TRIM31Q9BZY9 425 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 DMAC2Q9NW81 257 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 DNM3Q9UQ16 869 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 ALG6Q9Y672 507 aa10.98□□□□□ -0.65
UPF3B-201ENST00000276201 TLDC2A0PJX2 215 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 STAM2O75886 525 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 GNAZP19086 355 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 MAN1A1P33908 653 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 FMO5P49326 533 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 DRAP1Q14919 205 aaPredicted RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SNX17Q15036 470 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SEL1L2Q5TEA6 688 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SLC39A5Q6ZMH5 540 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 RGS9BPQ6ZS82 235 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 ETNPPLQ8TBG4 499 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 EPS8L3Q8TE67 593 aaKnown RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 ARHGEF26Q96DR7 871 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 ANO3Q9BYT9 981 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 LRMDAQ9H2I8 198 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 SPATS2LQ9NUQ6 558 aaKnown RBP10.97□□□□□ -0.65
UPF3B-201ENST00000276201 DNAJC12Q9UKB3 198 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 L3MBTL1Q9Y468 752 aa10.97□□□□□ -0.65
UPF3B-201ENST00000276201 ADGRA3Q8IWK6 1321 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms