RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ACTN3Q08043 901 aaPredicted RBP12.46□□□□□ -0.42
SHPRH-201ENST00000275233 PDIA5Q14554 519 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 C6orf10Q5SRN2 563 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 C4orf33Q8N1A6 199 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 ATL2Q8NHH9 583 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 NT5C1AQ9BXI3 368 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 STK33Q9BYT3 514 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 ETNK1Q9HBU6 452 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 C5orf58C9J3I9 102 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 CD4P01730 458 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 SLC9A1P19634 815 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 CENPAP49450 140 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 DMC1Q14565 340 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 MYCBPQ99417 103 aaPredicted RBP12.46□□□□□ -0.42
SHPRH-201ENST00000275233 GPR63Q9BZJ6 419 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 MTIF3Q9H2K0 278 aaKnown RBP12.46□□□□□ -0.42
SHPRH-201ENST00000275233 IL1RL2Q9HB29 575 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 ZCCHC17Q9NP64 241 aaKnown RBP12.46□□□□□ -0.42
SHPRH-201ENST00000275233 NOP53Q9NZM5 478 aaKnown RBP12.46□□□□□ -0.42
SHPRH-201ENST00000275233 PLA2R1Q13018 1463 aa12.46□□□□□ -0.42
SHPRH-201ENST00000275233 RASA1P20936 1047 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 SNX17Q15036 470 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 PATL1Q86TB9 770 aaKnown RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 CPB2Q96IY4 423 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 WDR24Q96S15 920 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 SELENONQ9NZV5 590 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ZC3H7BQ9UGR2 993 aaKnown RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ANGPT2O15123 496 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 SLC16A3O15427 465 aaKnown RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ITPK1Q13572 414 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 MEI1Q5TIA1 1274 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 JMJD4Q9H9V9 463 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ADAM21Q9UKJ8 722 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 PFASO15067 1338 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 LRG1P02750 347 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 CETPP11597 493 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 SOAT1P35610 550 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 SLC1A1P43005 524 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 CPT1AP50416 773 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 LRRC36Q1X8D7 754 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ICA1LQ8NDH6 482 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 V9GYQ6 96 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ENDOD1O94919 500 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 MAP3K6O95382 1288 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 PGK2P07205 417 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 TCN1P20061 433 aaPredicted RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 HARS2P49590 506 aaKnown RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ADNPQ9H2P0 1102 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 FAM96AQ9H5X1 160 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ERAP1Q9NZ08 941 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ARHGEF40Q8TER5 1519 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 A2ML1A8K2U0 1454 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 H0Y626 953 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 UCHL3P15374 230 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 AVPR1AP37288 418 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 EXOSC10Q01780 885 aaKnown RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 OCA2Q04671 838 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 SDE2Q6IQ49 451 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 CHSY1Q86X52 802 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 SPATA4Q8NEY3 305 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 HPDLQ96IR7 371 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 KLF6Q99612 283 aaPredicted RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 SMAD5Q99717 465 aaKnown RBP12.45□□□□□ -0.42
SHPRH-201ENST00000275233 FBXO28Q9NVF7 368 aa12.45□□□□□ -0.42
SHPRH-201ENST00000275233 ENO3P13929 434 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 BTKQ06187 659 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 WASHC5Q12768 1159 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 DPYDQ12882 1025 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 DHX34Q14147 1143 aaKnown RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 MFSD4BQ5TF39 518 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 IFNEQ86WN2 208 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 ARHGEF26Q96DR7 871 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 ATP6V1G3Q96LB4 118 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 EPB41L4AQ9HCS5 686 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 MRPL40Q9NQ50 206 aaKnown RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 KCNH7Q9NS40 1196 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 C17orf102A2RUQ5 167 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 DGKIO75912 1065 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 STK4Q13043 487 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 KCNB1Q14721 858 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 SHCBP1Q8NEM2 672 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 SCFD1Q8WVM8 642 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 TARS2Q9BW92 718 aaKnown RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 GOLPH3Q9H4A6 298 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 FAM47DPA6NHR8 397 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 VTNP04004 478 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 MZF1P28698 734 aaPredicted RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 TFR2Q9UP52 801 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 HSPA9P38646 679 aaKnown RBP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 CYTH1Q15438 398 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 TKFCQ3LXA3 575 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 TBC1D19Q8N5T2 526 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 COG1Q8WTW3 980 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 FAM151AQ8WW52 585 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 ERLEC1Q96DZ1 483 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms