RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SP100P23497 879 aaPredicted RBP13.67□□□□□ -0.22
COL8A1-202ENST00000273342 CIITAP33076 1130 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 FAM102BQ5T8I3 360 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SPOPLQ6IQ16 392 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 TTC7BQ86TV6 843 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 CCNJLQ8IV13 435 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 VPS52Q8N1B4 723 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 DCAF4Q8WV16 495 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 WDR60Q8WVS4 1066 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SHC3Q92529 594 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 MCUR1Q96AQ8 359 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 DDX27Q96GQ7 796 aaKnown RBP13.67□□□□□ -0.22
COL8A1-202ENST00000273342 LGALS13Q9UHV8 139 aa13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL8A1-202ENST00000273342 SORBS3O60504 671 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 ATP9AO75110 1047 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 CLNKQ7Z7G1 428 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 EGFL6Q8IUX8 553 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 TEKT1Q969V4 418 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 NT5C1BQ96P26 610 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 SLC17A7Q9P2U7 560 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 SEL1LQ9UBV2 794 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 GYG2O15488 501 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 CETN2P41208 172 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 RASSF2P50749 326 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 CCNG1P51959 295 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 CEP55Q53EZ4 464 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 ACSBG2Q5FVE4 666 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.66□□□□□ -0.22
COL8A1-202ENST00000273342 HELQQ8TDG4 1101 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 MORC4Q8TE76 937 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 CFAP57Q96MR6 1250 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 ACCSQ96QU6 501 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 WASF2Q9Y6W5 498 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 CDK5RAP2Q96SN8 1893 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 GRIN3BO60391 1043 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 MTA2O94776 668 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 PTPN4P29074 926 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 SERPINB3P29508 390 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 MRPS35P82673 323 aaKnown RBP13.66□□□□□ -0.22
COL8A1-202ENST00000273342 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 PDK4Q16654 411 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 C4orf50Q6ZRC1 276 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 MIER3Q7Z3K6 550 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 MCOLN2Q8IZK6 566 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 TEX9Q8N6V9 391 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 RBBP8NLQ8NC74 664 aaPredicted RBP13.66□□□□□ -0.22
COL8A1-202ENST00000273342 DENND1AQ8TEH3 1009 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 PTPRN2Q92932 1015 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 TMEM121Q9BTD3 319 aa13.66□□□□□ -0.22
COL8A1-202ENST00000273342 WFS1O76024 890 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 RFX1P22670 979 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 NSFP46459 744 aaKnown RBP13.65□□□□□ -0.22
COL8A1-202ENST00000273342 SH3BP5LQ7L8J4 393 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 DDX1Q92499 740 aaKnown RBP13.65□□□□□ -0.22
COL8A1-202ENST00000273342 CCDC17Q96LX7 622 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 CYTH2Q99418 400 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 TBX10O75333 385 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 ATP5HO75947 161 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 ADSSP30520 456 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 TFDP1Q14186 410 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 CLEC16AQ2KHT3 1053 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 FYB2Q5VWT5 728 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 KRT39Q6A163 491 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 INPP5DQ92835 1189 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 KIFAP3Q92845 792 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 WDR11Q9BZH6 1224 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 DCLRE1BQ9H816 532 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 RAB20Q9NX57 234 aa13.65□□□□□ -0.22
COL8A1-202ENST00000273342 NHSQ6T4R5 1651 aa13.65□□□□□ -0.23
COL8A1-202ENST00000273342 SGK1O00141 431 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 LIN7AO14910 233 aaPredicted RBP13.64□□□□□ -0.23
COL8A1-202ENST00000273342 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 GYS1P13807 737 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 KCNA3P22001 575 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 CRKP46108 304 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 RAB27AP51159 221 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 NRLP54845 237 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 NR1H3Q13133 447 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 THOC5Q13769 683 aaKnown RBP13.64□□□□□ -0.23
COL8A1-202ENST00000273342 SV2AQ7L0J3 742 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 TCP10LQ8TDR4 215 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 TTC17Q96AE7 1141 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 RBM17Q96I25 401 aaKnown RBP13.64□□□□□ -0.23
COL8A1-202ENST00000273342 ZNF333Q96JL9 665 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 TEKT3Q9BXF9 490 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 FBXO28Q9NVF7 368 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 EURLQ9NYK6 297 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 NYAP2Q9P242 653 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 ZHX2Q9Y6X8 837 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.64□□□□□ -0.23
COL8A1-202ENST00000273342 TNRC6CQ9HCJ0 1690 aaKnown RBP13.64□□□□□ -0.23
COL8A1-202ENST00000273342 KIF13BQ9NQT8 1826 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 SMAPO00193 183 aa13.64□□□□□ -0.23
COL8A1-202ENST00000273342 SLC26A4O43511 780 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms