RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 ANKMY2Q8IV38 441 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 CCDC33Q8N5R6 958 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 ST6GALNAC4Q9H4F1 302 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 POLIQ9UNA4 740 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 TCP11X1B4DZS4 312 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 GAS8O95995 478 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 TMED2Q15363 201 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 LIN9Q5TKA1 542 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 IZUMO3Q5VZ72 239 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 NUGGCQ68CJ6 796 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 CEP57Q86XR8 500 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 FBXL18Q96ME1 805 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 TMEM121Q9BTD3 319 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 TXLNGYQ9BZA5 131 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 ELP3Q9H9T3 547 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 KIF9Q9HAQ2 790 aa17.66■□□□□ 0.42
VPS54-201ENST00000272322 GRAP2O75791 330 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 CETPP11597 493 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 GPAT2Q6NUI2 795 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 CATSPERGQ6ZRH7 1159 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.65■□□□□ 0.42
VPS54-201ENST00000272322 DDX27Q96GQ7 796 aaKnown RBP17.65■□□□□ 0.42
VPS54-201ENST00000272322 CLMNQ96JQ2 1002 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 ADAM7Q9H2U9 754 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 SYNCQ9H7C4 482 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 SPATA31C2B4DYI2 1134 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 GCNT1Q02742 428 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 GAD2Q05329 585 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 REPS2Q8NFH8 660 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 NLGN2Q8NFZ4 835 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 DCLK3Q9C098 648 aa17.65■□□□□ 0.42
VPS54-201ENST00000272322 RARGP13631 454 aa17.64■□□□□ 0.42
VPS54-201ENST00000272322 GARTP22102 1010 aa17.64■□□□□ 0.42
VPS54-201ENST00000272322 EIF3BP55884 814 aaKnown RBP17.64■□□□□ 0.42
VPS54-201ENST00000272322 PPP2R5EQ16537 467 aa17.64■□□□□ 0.42
VPS54-201ENST00000272322 PNMA8AQ86V59 439 aaPredicted RBP17.64■□□□□ 0.42
VPS54-201ENST00000272322 FBXO16Q8IX29 292 aaPredicted RBP17.64■□□□□ 0.42
VPS54-201ENST00000272322 ART4Q93070 314 aa17.64■□□□□ 0.42
VPS54-201ENST00000272322 KLRG1Q96E93 195 aa17.64■□□□□ 0.42
VPS54-201ENST00000272322 SAYSD1Q9NPB0 183 aa17.64■□□□□ 0.42
VPS54-201ENST00000272322 ARIH2O95376 493 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 POTEJP0CG39 1038 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 SMAD1Q15797 465 aaKnown RBP17.64■□□□□ 0.41
VPS54-201ENST00000272322 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.64■□□□□ 0.41
VPS54-201ENST00000272322 VPS37BQ9H9H4 285 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 HOXC10Q9NYD6 342 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 TP73O15350 636 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 DDNO94850 711 aaPredicted RBP17.64■□□□□ 0.41
VPS54-201ENST00000272322 BRAFP15056 766 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 NOMO3P69849 1222 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 GPS1Q13098 491 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 VGLL4Q14135 290 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 E2F5Q15329 346 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 C6orf118Q5T5N4 469 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 KCNV1Q6PIU1 500 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 ABRAQ8N0Z2 381 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 TFAP2BQ92481 460 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 PCYT2Q99447 389 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 PORCNQ9H237 461 aa17.64■□□□□ 0.41
VPS54-201ENST00000272322 SGK1O00141 431 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 CLTAP09496 248 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 DRD4P21917 467 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 MPP2Q14168 576 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 WDR72Q3MJ13 1102 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 C4orf33Q8N1A6 199 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 TLCD1Q96CP7 247 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 KLF6Q99612 283 aaPredicted RBP17.63■□□□□ 0.41
VPS54-201ENST00000272322 C12orf65Q9H3J6 166 aaKnown RBP17.63■□□□□ 0.41
VPS54-201ENST00000272322 KAT6AQ92794 2004 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 WDR91A4D1P6 747 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 FSCN2O14926 492 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 PROSCO94903 275 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 HSPA6P17066 643 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 ACO1P21399 889 aaKnown RBP17.63■□□□□ 0.41
VPS54-201ENST00000272322 OGDHQ02218 1023 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 CDO1Q16878 200 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 ERMARDQ5T6L9 678 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 TCP11Q8WWU5 503 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 SNF8Q96H20 258 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 IRF6O14896 467 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 TMEM191BP0C7N4 346 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 FDX1P10109 184 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 IRX3P78415 501 aaPredicted RBP17.63■□□□□ 0.41
VPS54-201ENST00000272322 SLMAPQ14BN4 828 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 PSMD6Q15008 389 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 DNAJC24Q6P3W2 148 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 RHOT1Q8IXI2 618 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 RBM15Q96T37 977 aaKnown RBP eCLIP17.63■□□□□ 0.417e-10■■■■□ 20.1
VPS54-201ENST00000272322 PDLIM7Q9NR12 457 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 PDGFCQ9NRA1 345 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 CISHQ9NSE2 258 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 AGTPBP1Q9UPW5 1226 aa17.63■□□□□ 0.41
VPS54-201ENST00000272322 A6NNZ2 444 aa17.62■□□□□ 0.41
VPS54-201ENST00000272322 BHMG1C9JSJ3 638 aaPredicted RBP17.62■□□□□ 0.41
VPS54-201ENST00000272322 ARSEP51690 589 aa17.62■□□□□ 0.41
VPS54-201ENST00000272322 TUBB8Q3ZCM7 444 aa17.62■□□□□ 0.41
VPS54-201ENST00000272322 EEF1DP3Q658K8 133 aa17.62■□□□□ 0.41
VPS54-201ENST00000272322 MON1BQ7L1V2 547 aa17.62■□□□□ 0.41
VPS54-201ENST00000272322 TBC1D1Q86TI0 1168 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms