RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 EPN1Q9Y6I3 576 aaPredicted RBP26.52■■□□□ 1.84
SSBP4-201ENST00000270061 PHLPP2Q6ZVD8 1323 aa26.51■■□□□ 1.84
SSBP4-201ENST00000270061 GTF2F1P35269 517 aaKnown RBP eCLIP26.51■■□□□ 1.831e-6■■■■□ 26.2
SSBP4-201ENST00000270061 CTC1Q2NKJ3 1217 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 LEXMQ3ZCV2 418 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 RRAGAQ7L523 313 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 FAM193BQ96PV7 902 aaPredicted RBP26.51■■□□□ 1.83
SSBP4-201ENST00000270061 ENTPD7Q9NQZ7 604 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 PMM2O15305 246 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 P4HA2O15460 535 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 N4BP1O75113 896 aaKnown RBP26.51■■□□□ 1.83
SSBP4-201ENST00000270061 SLC9A1P19634 815 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 POLR2FP61218 127 aaKnown RBP26.51■■□□□ 1.83
SSBP4-201ENST00000270061 KLHDC7AQ5VTJ3 777 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 RBM23Q86U06 439 aaKnown RBP26.51■■□□□ 1.83
SSBP4-201ENST00000270061 ZNF280BQ86YH2 543 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 POMGNT1Q8WZA1 660 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 BICD1Q96G01 975 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 GAD1Q99259 594 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 TCF25Q9BQ70 676 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 DNAJB4Q9UDY4 337 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 MYO6Q9UM54 1294 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 DAAM1Q9Y4D1 1078 aa26.51■■□□□ 1.83
SSBP4-201ENST00000270061 ARL5CA6NH57 179 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 LRRC53A6NM62 1247 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 TTLL13PA6NNM8 815 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 H3BQ06 376 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-201ENST00000270061 POMCP01189 267 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 GALTP07902 379 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 MLH1P40692 756 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 NRIP1P48552 1158 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 LIG4P49917 911 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 HSP90AA2PQ14568 343 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-201ENST00000270061 SNRNP35Q16560 246 aaKnown RBP26.5■■□□□ 1.83
SSBP4-201ENST00000270061 MFSD14AQ96MC6 490 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 UHRF1Q96T88 793 aaPredicted RBP26.5■■□□□ 1.83
SSBP4-201ENST00000270061 DESI2Q9BSY9 194 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 TLE6Q9H808 572 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 KIAA1586Q9HCI6 787 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 GIT1Q9Y2X7 761 aa26.5■■□□□ 1.83
SSBP4-201ENST00000270061 FSCN2O14926 492 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 NDUFA10O95299 355 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 PLPP4Q5VZY2 271 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 SLFN12LQ6IEE8 588 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 GPD1LQ8N335 351 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 ZSWIM2Q8NEG5 633 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 ADPGKQ9BRR6 497 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 PDZD7Q9H5P4 517 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 SIX2Q9NPC8 291 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 NGRNQ9NPE2 291 aaKnown RBP26.49■■□□□ 1.83
SSBP4-201ENST00000270061 GCNT4Q9P109 453 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 TRIP11Q15643 1979 aa26.49■■□□□ 1.83
SSBP4-201ENST00000270061 INPPL1O15357 1258 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 DDHD2O94830 711 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 TRIM49P0CI25 452 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 TRIM49CP0CI26 452 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 UCHL3P15374 230 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 LTBRP36941 435 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 CBWD6Q4V339 395 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 CBWD3Q5JTY5 395 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 CBWD5Q5RIA9 395 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 TMC7Q7Z402 723 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.48■■□□□ 1.83
SSBP4-201ENST00000270061 TMC2Q8TDI7 906 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 NHEJ1Q9H9Q4 299 aaPredicted RBP26.48■■□□□ 1.83
SSBP4-201ENST00000270061 USP20Q9Y2K6 914 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 B4GALT3O60512 393 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 ADRB2P07550 413 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 AKAP5P24588 427 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 CYLC1P35663 651 aaPredicted RBP26.48■■□□□ 1.83
SSBP4-201ENST00000270061 C1orf220Q5T0J3 134 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 TMEM173Q86WV6 379 aaPredicted RBP26.48■■□□□ 1.83
SSBP4-201ENST00000270061 CBWD2Q8IUF1 395 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 IGSF21Q96ID5 467 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 ZFP42Q96MM3 310 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 NLRC4Q9NPP4 1024 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 AIPL1Q9NZN9 384 aa26.48■■□□□ 1.83
SSBP4-201ENST00000270061 LINC01565O15544 149 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 EDN1P05305 212 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 SLC11A1P49279 550 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 ADAM15Q13444 863 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 TRIM65Q6PJ69 517 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 ZPBP2Q6X784 338 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 USP37Q86T82 979 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 EFHBQ8N7U6 833 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 PLEKHO2Q8TD55 490 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 TMEM175Q9BSA9 504 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 PARP2Q9UGN5 583 aa26.47■■□□□ 1.83
SSBP4-201ENST00000270061 GOLGA8IPA6NC78 632 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 GOLGA8JA6NMD2 632 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 EXTL3O43909 919 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 ALDH2P05091 517 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 SCNN1GP51170 649 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 DLG4P78352 724 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 MYL7Q01449 175 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 DLX2Q07687 328 aaPredicted RBP26.46■■□□□ 1.83
SSBP4-201ENST00000270061 SFMBT2Q5VUG0 894 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 PTCRAQ6ISU1 281 aaPredicted RBP26.46■■□□□ 1.83
SSBP4-201ENST00000270061 PARD3BQ8TEW8 1205 aa26.46■■□□□ 1.83
SSBP4-201ENST00000270061 SAAL1Q96ER3 474 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms