RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 UVRAGQ9P2Y5 699 aa20.27■□□□□ 0.84
CPNE7-201ENST00000268720 MTRF1LQ9UGC7 380 aaKnown RBP20.27■□□□□ 0.84
CPNE7-201ENST00000268720 FBXO40Q9UH90 709 aa20.27■□□□□ 0.84
CPNE7-201ENST00000268720 PCYOX1Q9UHG3 505 aa20.27■□□□□ 0.84
CPNE7-201ENST00000268720 OATP04181 439 aa20.27■□□□□ 0.83
CPNE7-201ENST00000268720 KIF2BQ8N4N8 673 aa20.27■□□□□ 0.83
CPNE7-201ENST00000268720 SGSM3Q96HU1 749 aa20.27■□□□□ 0.83
CPNE7-201ENST00000268720 MYCBPQ99417 103 aaPredicted RBP20.27■□□□□ 0.83
CPNE7-201ENST00000268720 PORCNQ9H237 461 aa20.27■□□□□ 0.83
CPNE7-201ENST00000268720 DHX33Q9H6R0 707 aaKnown RBP20.27■□□□□ 0.83
CPNE7-201ENST00000268720 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.27■□□□□ 0.83
CPNE7-201ENST00000268720 DRG2P55039 364 aaKnown RBP20.26■□□□□ 0.83
CPNE7-201ENST00000268720 CLDN10P78369 228 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 STRN3Q13033 797 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 LACTB2Q53H82 288 aaPredicted RBP20.26■□□□□ 0.83
CPNE7-201ENST00000268720 HIBCHQ6NVY1 386 aaPredicted RBP20.26■□□□□ 0.83
CPNE7-201ENST00000268720 TMEM270Q6UE05 265 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 EEPD1Q7L9B9 569 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 APOBEC3FQ8IUX4 373 aaKnown RBP20.26■□□□□ 0.83
CPNE7-201ENST00000268720 MCOLN2Q8IZK6 566 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 SAE1Q9UBE0 346 aaPredicted RBP20.26■□□□□ 0.83
CPNE7-201ENST00000268720 TRIM33Q9UPN9 1127 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 GOLGA8SH3BPF8 625 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 GOLGA8MH3BSY2 632 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 K7ERI5 159 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 ADCY8P40145 1251 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 PIK3CAP42336 1068 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 CALCOCO2Q13137 446 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 ORC1Q13415 861 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 PSMD6Q15008 389 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 TCP11Q8WWU5 503 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 CENPTQ96BT3 561 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 PCYT2Q99447 389 aa20.26■□□□□ 0.83
CPNE7-201ENST00000268720 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.26■□□□□ 0.83
CPNE7-201ENST00000268720 TCP11X1B4DZS4 312 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 ECM2O94769 699 aaPredicted RBP20.25■□□□□ 0.83
CPNE7-201ENST00000268720 ATG7O95352 703 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 GSCP56915 257 aaPredicted RBP20.25■□□□□ 0.83
CPNE7-201ENST00000268720 C6orf118Q5T5N4 469 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 TBC1D1Q86TI0 1168 aaPredicted RBP20.25■□□□□ 0.83
CPNE7-201ENST00000268720 OR5B17Q8NGF7 314 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 KIF9Q9HAQ2 790 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.25■□□□□ 0.83
CPNE7-201ENST00000268720 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 ARMC9Q7Z3E5 817 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 MORC4Q8TE76 937 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 KDM4CQ9H3R0 1056 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 RBAKQ9NYW8 714 aaPredicted RBP20.25■□□□□ 0.83
CPNE7-201ENST00000268720 AGAP1Q9UPQ3 857 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 PCDHB2Q9Y5E7 798 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.25■□□□□ 0.83
CPNE7-201ENST00000268720 STYXL1Q9Y6J8 313 aa20.25■□□□□ 0.83
CPNE7-201ENST00000268720 TMEM120BA0PK00 339 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 PODXLO00592 558 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 SPAG7O75391 227 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 STAM2O75886 525 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 HSPA6P17066 643 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 ACO1P21399 889 aaKnown RBP20.24■□□□□ 0.83
CPNE7-201ENST00000268720 UBA1P22314 1058 aaKnown RBP20.24■□□□□ 0.83
CPNE7-201ENST00000268720 RPL7AP62424 266 aaKnown RBP20.24■□□□□ 0.83
CPNE7-201ENST00000268720 SPDYCQ5MJ68 293 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 TXNRD3NBQ6F5E7 133 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 FAM47EQ6ZV65 393 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 PNMA8AQ86V59 439 aaPredicted RBP20.24■□□□□ 0.83
CPNE7-201ENST00000268720 SRRM1Q8IYB3 904 aaKnown RBP20.24■□□□□ 0.83
CPNE7-201ENST00000268720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.24■□□□□ 0.831e-6■■□□□ 12.7
CPNE7-201ENST00000268720 DEPTORQ8TB45 409 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 SLC7A3Q8WY07 619 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 SPOCK2Q92563 424 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 ARHGEF2Q92974 986 aaKnown RBP20.24■□□□□ 0.83
CPNE7-201ENST00000268720 ART4Q93070 314 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 MTUS1Q9ULD2 1270 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 PASKQ96RG2 1323 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 AGTP01019 485 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 ATF7P17544 494 aaPredicted RBP20.24■□□□□ 0.83
CPNE7-201ENST00000268720 ARL2P36404 184 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 FASTKD3Q14CZ7 662 aaKnown RBP20.24■□□□□ 0.83
CPNE7-201ENST00000268720 CLUL1Q15846 466 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 CNGA2Q16280 664 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 WDR44Q5JSH3 913 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 SCARA5Q6ZMJ2 495 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 PIGWQ7Z7B1 504 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 MSTO1Q9BUK6 570 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 GPRC5DQ9NZD1 345 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 BAIAP2L1Q9UHR4 511 aa20.24■□□□□ 0.83
CPNE7-201ENST00000268720 POLR2AP24928 1970 aaKnown RBP20.23■□□□□ 0.83
CPNE7-201ENST00000268720 GSTTP1A0A1W2PQM5 241 aa20.23■□□□□ 0.83
CPNE7-201ENST00000268720 ZC3H11AO75152 810 aaKnown RBP eCLIP20.23■□□□□ 0.837e-7■■■■□ 22.8
CPNE7-201ENST00000268720 USP2O75604 605 aaPredicted RBP20.23■□□□□ 0.83
CPNE7-201ENST00000268720 ALDH5A1P51649 535 aaPredicted RBP20.23■□□□□ 0.83
CPNE7-201ENST00000268720 NRLP54845 237 aa20.23■□□□□ 0.83
CPNE7-201ENST00000268720 VGLL4Q14135 290 aa20.23■□□□□ 0.83
CPNE7-201ENST00000268720 CYP1B1Q16678 543 aa20.23■□□□□ 0.83
CPNE7-201ENST00000268720 ENOSF1Q7L5Y1 443 aa20.23■□□□□ 0.83
CPNE7-201ENST00000268720 ZBTB33Q86T24 672 aa20.23■□□□□ 0.83
CPNE7-201ENST00000268720 ANKS4BQ8N8V4 417 aa20.23■□□□□ 0.83
CPNE7-201ENST00000268720 FHDC1Q9C0D6 1143 aaPredicted RBP20.23■□□□□ 0.83
CPNE7-201ENST00000268720 GEMIN8Q9NWZ8 242 aaKnown RBP20.23■□□□□ 0.83
CPNE7-201ENST00000268720 SAMD15Q9P1V8 674 aa20.23■□□□□ 0.83
CPNE7-201ENST00000268720 PNMA3Q9UL41 463 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms