RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 MTMR8Q96EF0 704 aa17.61■□□□□ 0.41
PHRF1-201ENST00000264555 CGRRF1Q99675 332 aa17.61■□□□□ 0.41
PHRF1-201ENST00000264555 RANBP17Q9H2T7 1088 aaKnown RBP17.61■□□□□ 0.41
PHRF1-201ENST00000264555 SPECC1L-ADORA2AF8WAN1 911 aa17.61■□□□□ 0.41
PHRF1-201ENST00000264555 EML1O00423 815 aa17.61■□□□□ 0.41
PHRF1-201ENST00000264555 ARFIP2P53365 341 aa17.61■□□□□ 0.41
PHRF1-201ENST00000264555 DGKDQ16760 1214 aa17.61■□□□□ 0.41
PHRF1-201ENST00000264555 SKA2Q8WVK7 121 aaPredicted RBP17.61■□□□□ 0.41
PHRF1-201ENST00000264555 VWA5AO00534 786 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 DSG3P32926 999 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 PID1Q7Z2X4 250 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 CNPY4Q8N129 248 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 RYBPQ8N488 228 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-201ENST00000264555 C1orf131Q8NDD1 294 aaKnown RBP17.6■□□□□ 0.41
PHRF1-201ENST00000264555 XPO6Q96QU8 1125 aaKnown RBP17.6■□□□□ 0.41
PHRF1-201ENST00000264555 INTS13Q9NVM9 706 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 BCL9LQ86UU0 1499 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 TCP11X1B4DZS4 312 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 HAUS5O94927 633 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 ELF1P32519 619 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 SULT1E1P49888 294 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 PAPOLAP51003 745 aaKnown RBP17.6■□□□□ 0.41
PHRF1-201ENST00000264555 EPHB1P54762 984 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 RBBP5Q15291 538 aaKnown RBP17.6■□□□□ 0.41
PHRF1-201ENST00000264555 CRY2Q49AN0 593 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 NUDCD3Q8IVD9 361 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 SERPINI1Q99574 410 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 POP1Q99575 1024 aaKnown RBP17.6■□□□□ 0.41
PHRF1-201ENST00000264555 FIS1Q9Y3D6 152 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 MAGEA4P43358 317 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 KYNUQ16719 465 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 ERO1BQ86YB8 467 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 SCG3Q8WXD2 468 aaKnown RBP17.6■□□□□ 0.41
PHRF1-201ENST00000264555 TNFRSF25Q93038 417 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 OSGEPQ9NPF4 335 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 DCTN4Q9UJW0 460 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 CST8O60676 142 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 LMNAP02545 664 aaKnown RBP17.6■□□□□ 0.41
PHRF1-201ENST00000264555 GPD1P21695 349 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 OAZ1P54368 228 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 SPATA21Q7Z572 469 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 SPATA20Q8TB22 786 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 SGSM3Q96HU1 749 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 SIK3Q9Y2K2 1263 aa17.6■□□□□ 0.41
PHRF1-201ENST00000264555 LRRIQ3A6PVS8 624 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-201ENST00000264555 ACADSBP45954 432 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 ART3Q13508 389 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 SLC29A2Q14542 456 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 SLC13A1Q9BZW2 595 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 RAB6BQ9NRW1 208 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 PSMC3IPQ9P2W1 217 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-201ENST00000264555 XPO7Q9UIA9 1087 aaKnown RBP17.59■□□□□ 0.41
PHRF1-201ENST00000264555 ANGPTL2Q9UKU9 493 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 BAZ2BQ9UIF8 2168 aaKnown RBP17.59■□□□□ 0.41
PHRF1-201ENST00000264555 CFAP73A6NFT4 308 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 PJA2O43164 708 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 TTC4O95801 387 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 KRT10P13645 584 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 EVX2Q03828 476 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 ZNF484Q5JVG2 852 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 CEP120Q8N960 986 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 SPIRE2Q8WWL2 714 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 EPAS1Q99814 870 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 DMGDHQ9UI17 866 aaKnown RBP17.59■□□□□ 0.41
PHRF1-201ENST00000264555 CCL15-CCL14A0A0B4J2E2 113 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 F5H423 210 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-201ENST00000264555 CCL15Q16663 113 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 FSCBQ5H9T9 825 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 SV2AQ7L0J3 742 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 BTBD6Q96KE9 485 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 FAM118BQ9BPY3 351 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 MAGEB5Q9BZ81 275 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 ITGB3P05106 788 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 SEZ6Q53EL9 994 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 MPZL3Q6UWV2 235 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 SLC30A10Q6XR72 485 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 SRLQ86TD4 932 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 RASSF3Q86WH2 238 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 SLC20A1Q8WUM9 679 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 PABPC3Q9H361 631 aaKnown RBP17.59■□□□□ 0.41
PHRF1-201ENST00000264555 RAB21Q9UL25 225 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 ARL2BPQ9Y2Y0 163 aa17.59■□□□□ 0.41
PHRF1-201ENST00000264555 CHUKO15111 745 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 APRTP07741 180 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 PDGFRBP09619 1106 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 TAF1CQ15572 869 aaPredicted RBP17.58■□□□□ 0.41
PHRF1-201ENST00000264555 BTBD8Q5XKL5 378 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 SPATA18Q8TC71 538 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 ALKBH8Q96BT7 664 aaKnown RBP17.58■□□□□ 0.41
PHRF1-201ENST00000264555 MROH8Q9H579 483 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 LRRC4BQ9NT99 713 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 MEIS2O14770 477 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 CYP2C9P11712 490 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 SLC26A2P50443 739 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 ZNF518BQ9C0D4 1074 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 NOP53Q9NZM5 478 aaKnown RBP17.58■□□□□ 0.41
PHRF1-201ENST00000264555 PAK5Q9P286 719 aa17.58■□□□□ 0.41
PHRF1-201ENST00000264555 G3BP2Q9UN86 482 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms