RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 HAO1Q9UJM8 370 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 IVNS1ABPQ9Y6Y0 642 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 ATRNL1Q5VV63 1379 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 TTLL13PA6NNM8 815 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 PIK3R2O00459 728 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 P4HA2O15460 535 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 WDR4P57081 412 aaKnown RBP9.68□□□□□ -0.86
MSH4-201ENST00000263187 COPS2P61201 443 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 TRIM68Q6AZZ1 485 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 RHBDF2Q6PJF5 856 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 MFSD7Q6UXD7 560 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 VSIG1Q86XK7 387 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 ECHDC2Q86YB7 292 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 CCDC60Q8IWA6 550 aaPredicted RBP9.68□□□□□ -0.86
MSH4-201ENST00000263187 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
MSH4-201ENST00000263187 ERP27Q96DN0 273 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 SERPINB12Q96P63 405 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 MCEEQ96PE7 176 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 TCHPQ9BT92 498 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 ZWILCHQ9H900 591 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 KLHL14Q9P2G3 628 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 DCTN4Q9UJW0 460 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 ZNF541Q9H0D2 1346 aa9.68□□□□□ -0.86
MSH4-201ENST00000263187 KRT1P04264 644 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 MAPTP10636 758 aaKnown RBP9.67□□□□□ -0.86
MSH4-201ENST00000263187 GHRP10912 638 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 PECAM1P16284 738 aaPredicted RBP9.67□□□□□ -0.86
MSH4-201ENST00000263187 RPA3P35244 121 aaPredicted RBP9.67□□□□□ -0.86
MSH4-201ENST00000263187 HIRAP54198 1017 aaPredicted RBP9.67□□□□□ -0.86
MSH4-201ENST00000263187 TRAF1Q13077 416 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 MAMLD1Q13495 774 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 CLUL1Q15846 466 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 EP400NLQ6ZTU2 488 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 EEPD1Q7L9B9 569 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 CKAP2Q8WWK9 683 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 MRIQ9BWK5 157 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 HAPLN2Q9GZV7 340 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 RPAP3Q9H6T3 665 aaPredicted RBP9.67□□□□□ -0.86
MSH4-201ENST00000263187 GRID1Q9ULK0 1009 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 NEU2Q9Y3R4 380 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 SLX4Q8IY92 1834 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 LRRD1A4D1F6 860 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 SGK1O00141 431 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 CBX6O95503 412 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 WEE2P0C1S8 567 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 CA4P22748 312 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 PAX7P23759 505 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 BRD2P25440 801 aaKnown RBP9.67□□□□□ -0.86
MSH4-201ENST00000263187 FSTL1Q12841 308 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 PTK6Q13882 451 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 SPDYCQ5MJ68 293 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 XPNPEP1Q9NQW7 623 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 PXMP2Q9NR77 195 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 TBC1D22BQ9NU19 505 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 TJP2Q9UDY2 1190 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 SUFUQ9UMX1 484 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 ARL2BPQ9Y2Y0 163 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 NUB1Q9Y5A7 615 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 PCDHA10Q9Y5I2 948 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 LTBP1Q14766 1721 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 MTA2O94776 668 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 PROSCO94903 275 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 MAP3K6O95382 1288 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 NR3C2P08235 984 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 ASNSP08243 561 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 MYBL1P10243 752 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 TAC1P20366 129 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 GBP1P32455 592 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 PRKCEQ02156 737 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 MFSD5Q6N075 450 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 DCUN1D2Q6PH85 259 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 C4orf19Q8IY42 314 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 ANKLE1Q8NAG6 615 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 ZBTB10Q96DT7 871 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 ROPN1BQ9BZX4 212 aaPredicted RBP9.67□□□□□ -0.86
MSH4-201ENST00000263187 MYLK2Q9H1R3 596 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 ROPN1Q9HAT0 212 aaPredicted RBP9.67□□□□□ -0.86
MSH4-201ENST00000263187 SLC24A3Q9HC58 644 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 RNF146Q9NTX7 359 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 FBXO40Q9UH90 709 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 PCDHB2Q9Y5E7 798 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 ATP8B3O60423 1300 aa9.67□□□□□ -0.86
MSH4-201ENST00000263187 VNN1O95497 513 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 CST3P01034 146 aaPredicted RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 SSTR1P30872 391 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 POLGP54098 1239 aaPredicted RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 NFX1Q12986 1120 aaKnown RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 PDIA2Q13087 525 aaKnown RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 MYBPC2Q14324 1141 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 SMAD1Q15797 465 aaKnown RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 TNFAIP8L3Q5GJ75 292 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 WLSQ5T9L3 541 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 RHOT1Q8IXI2 618 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 SLC16A10Q8TF71 515 aa9.66□□□□□ -0.86
MSH4-201ENST00000263187 MOV10L1Q9BXT6 1211 aaKnown RBP9.66□□□□□ -0.86
MSH4-201ENST00000263187 RBAKQ9NYW8 714 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms