RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FAM162AQ96A26 154 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 E2F7Q96AV8 911 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 PRDM15P57071 1507 aaPredicted RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 NFIBO00712 420 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 FKBP9O95302 570 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 FBXW4P57775 412 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 PPP1R18Q6NYC8 613 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 C16orf89Q6UX73 402 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 FKBP9P1Q75LS8 142 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 BNIPLQ7Z465 357 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 BEST2Q8NFU1 509 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 MRPL4Q9BYD3 311 aaKnown RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 OSBPL8Q9BZF1 889 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 METTL5Q9NRN9 209 aaKnown RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.395e-7■□□□□ 10.8
SMG6-201ENST00000263073 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 EYA4O95677 639 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 DLGAP3O95886 979 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 PHKA2P46019 1235 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 TPI1P60174 286 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 MAPRE2Q15555 327 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 SEZ6Q53EL9 994 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 IYDQ6PHW0 289 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 NDUFAF2Q8N183 169 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 ARHGEF26Q96DR7 871 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 C7orf25Q9BPX7 421 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 HERC5Q9UII4 1024 aaKnown RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 MTO1Q9Y2Z2 717 aaKnown RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 SERPINB10P48595 397 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 HERVK_113P62684 666 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 GPSM2P81274 684 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 GPR162Q16538 588 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 CCDC142Q17RM4 750 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 NLGN1Q8N2Q7 840 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 ZNF280CQ8ND82 737 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 RUBCNQ92622 972 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 PTPRN2Q92932 1015 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 SGSM3Q96HU1 749 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 CNDP1Q96KN2 507 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 UNKQ9C0B0 810 aaKnown RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 TBC1D22BQ9NU19 505 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 SERPIND1P05546 499 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 H2AFXP16104 143 aaPredicted RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 SLC1A1P43005 524 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 TMEM62Q0P6H9 643 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 SNRNP35Q16560 246 aaKnown RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 TRAPPC11Q7Z392 1133 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 THEM5Q8N1Q8 247 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 RBBP8NLQ8NC74 664 aaPredicted RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 FAM136AQ96C01 138 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 PIF1Q9H611 641 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 CCDC134Q9H6E4 229 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 ANKZF1Q9H8Y5 726 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 STAP1Q9ULZ2 295 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 TFE3P19532 575 aaPredicted RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 TTC39BQ5VTQ0 682 aaPredicted RBP12.63□□□□□ -0.39
SMG6-201ENST00000263073 ITPRIPL1Q6GPH6 555 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 PACS2Q86VP3 889 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 EHD4Q9H223 541 aa12.63□□□□□ -0.39
SMG6-201ENST00000263073 CST8O60676 142 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 HMOX2P30519 316 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 S100A5P33763 92 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 MTDHQ86UE4 582 aaKnown RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 ASIC4Q96FT7 647 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 TMEM237Q96Q45 408 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 BRD8Q9H0E9 1235 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 PLEKHA5Q9HAU0 1116 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 SENP1Q9P0U3 644 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 SSU72P8A0A1W2PR75 194 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 SERPINI2O75830 405 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 UBOX5O94941 541 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 MRPS35P82673 323 aaKnown RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 TTC33Q6PID6 262 aaPredicted RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 CNPY4Q8N129 248 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 ANKARQ7Z5J8 1434 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 M0R3G1 203 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 KCNJ6P48051 423 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 CCDC103Q8IW40 242 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 TPCN2Q8NHX9 752 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 FAM84BQ96KN1 310 aaPredicted RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 KCNK16Q96T55 309 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 PRPF18Q99633 342 aaKnown RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 FEM1BQ9UK73 627 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 AGAP1Q9UPQ3 857 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 MEI4A8MW99 385 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 TRIM49D1C9J1S8 452 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 NFKBIAP25963 317 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 CASP4P49662 377 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 CSE1LP55060 971 aaKnown RBP12.62□□□□□ -0.39
SMG6-201ENST00000263073 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
SMG6-201ENST00000263073 KCTD17Q8N5Z5 321 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms