RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 TAF3Q5VWG9 929 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 SCARA5Q6ZMJ2 495 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 RNF10Q8N5U6 811 aaKnown RBP13.92□□□□□ -0.18
VAMP7-201ENST00000262640 LRRC52Q8N7C0 313 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 ZNF333Q96JL9 665 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 PACSIN1Q9BY11 444 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 CRISPLD2Q9H0B8 497 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 FAM124BQ9H5Z6 455 aaPredicted RBP13.92□□□□□ -0.18
VAMP7-201ENST00000262640 ACP6Q9NPH0 428 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 TUBGCP4Q9UGJ1 667 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 POLIQ9UNA4 740 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 DUSP10Q9Y6W6 482 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 ZNF623O75123 536 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 MMEP08473 750 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 SKIP12755 728 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 FMO1Q01740 532 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 SLC35F6Q8N357 371 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 TMEM130Q8N3G9 435 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 C18orf25Q96B23 403 aaPredicted RBP13.92□□□□□ -0.18
VAMP7-201ENST00000262640 GIT1Q9Y2X7 761 aa13.92□□□□□ -0.18
VAMP7-201ENST00000262640 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.92□□□□□ -0.18
VAMP7-201ENST00000262640 MGEA5O60502 916 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 TACC1O75410 805 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 WEE2P0C1S8 567 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 GZMAP12544 262 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 SELPP16109 830 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 CD58P19256 250 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 TNNC1P63316 161 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 TTC39CQ8N584 583 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 A0A0U1RQF3 1178 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 ANO9A1A5B4 782 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 ATF7P17544 494 aaPredicted RBP13.91□□□□□ -0.18
VAMP7-201ENST00000262640 GNA15P30679 374 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 PKN2Q16513 984 aaKnown RBP13.91□□□□□ -0.18
VAMP7-201ENST00000262640 C9orf57Q5W0N0 161 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 LRRC8DQ7L1W4 858 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 TRIM58Q8NG06 486 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 NOX5Q96PH1 765 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 PCDHB18PQ96TA0 734 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 ADAM2Q99965 735 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 ISCUQ9H1K1 167 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 SLC38A7Q9NVC3 462 aa13.91□□□□□ -0.18
VAMP7-201ENST00000262640 TMCO5BA8MYB1 307 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 FANCGO15287 622 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 RTN2O75298 545 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 TFRCP02786 760 aaKnown RBP13.9□□□□□ -0.18
VAMP7-201ENST00000262640 TMEM253P0C7T8 217 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 GALCP54803 685 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 MBTPS1Q14703 1052 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 ARMC5Q96C12 935 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 PGBD4Q96DM1 585 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 ALS2CR12Q96Q35 445 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 A0A0A6YYK5 440 aaPredicted RBP13.9□□□□□ -0.18
VAMP7-201ENST00000262640 CTAGE9A4FU28 777 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 ANKRD62A6NC57 917 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 PTGESO14684 152 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 PNPLA4P41247 253 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 TRIM72Q6ZMU5 477 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 FAM43BQ6ZT52 329 aaPredicted RBP13.9□□□□□ -0.18
VAMP7-201ENST00000262640 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.18
VAMP7-201ENST00000262640 ZNF560Q96MR9 790 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 PPP1R10Q96QC0 940 aaKnown RBP13.9□□□□□ -0.18
VAMP7-201ENST00000262640 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 SMYD3Q9H7B4 428 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 TAS2R14Q9NYV8 317 aa13.9□□□□□ -0.18
VAMP7-201ENST00000262640 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 PIRO00625 290 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 MOCS3O95396 460 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 MLH1P40692 756 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 RAP1GAPP47736 663 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 IFI16Q16666 785 aaKnown RBP13.89□□□□□ -0.19
VAMP7-201ENST00000262640 CLEC16AQ2KHT3 1053 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 AGMOQ6ZNB7 445 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 NAPGQ99747 312 aaPredicted RBP13.89□□□□□ -0.19
VAMP7-201ENST00000262640 SDCBP2Q9H190 292 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 UBN1Q9NPG3 1134 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 SALL4Q9UJQ4 1053 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 NCANO14594 1321 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 PPEF2O14830 753 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 THAP12O43422 761 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 FTLP02792 175 aaPredicted RBP13.89□□□□□ -0.19
VAMP7-201ENST00000262640 PAEPP09466 180 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 LRPAP1P30533 357 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 MNX1P50219 401 aaPredicted RBP13.89□□□□□ -0.19
VAMP7-201ENST00000262640 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
VAMP7-201ENST00000262640 ANKRD33Q7Z3H0 272 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 LPPQ93052 612 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 ZFP42Q96MM3 310 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 GAD1Q99259 594 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 RNF19AQ9NV58 838 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 DNAH12Q6ZR08 3092 aa13.89□□□□□ -0.19
VAMP7-201ENST00000262640 PDCD11Q14690 1871 aaKnown RBP13.89□□□□□ -0.19
VAMP7-201ENST00000262640 ARL5CA6NH57 179 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 MEIS3P2A8K0S8 358 aa13.88□□□□□ -0.19
VAMP7-201ENST00000262640 PQBP1O60828 265 aaKnown RBP13.88□□□□□ -0.19
VAMP7-201ENST00000262640 CALCAP01258 141 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms