RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 MCOLN2Q8IZK6 566 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 TMEM8AQ9HCN3 771 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 SLCO1B3Q9NPD5 702 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 UVRAGQ9P2Y5 699 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 RASA4BC9J798 803 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 GOLGA8SH3BPF8 625 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 GOLGA8MH3BSY2 632 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 P4HA2O15460 535 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 RASA4O43374 803 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 MTA2O94776 668 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 ANP32DO95626 131 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 HARSP12081 509 aaKnown RBP10.67□□□□□ -0.7
LIG3-201ENST00000262327 ATF7P17544 494 aaPredicted RBP10.67□□□□□ -0.7
LIG3-201ENST00000262327 TNNI1P19237 187 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 RPS6P62753 249 aaKnown RBP10.67□□□□□ -0.7
LIG3-201ENST00000262327 TRAF1Q13077 416 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 DNAJC3Q13217 504 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 NOL9Q5SY16 702 aaKnown RBP10.67□□□□□ -0.7
LIG3-201ENST00000262327 C4orf33Q8N1A6 199 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 ZNF516Q92618 1163 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 P3H4Q92791 437 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 KIFAP3Q92845 792 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 SERPINB12Q96P63 405 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 LBHD1Q9BQE6 289 aaPredicted RBP10.67□□□□□ -0.7
LIG3-201ENST00000262327 TMEM109Q9BVC6 243 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 KIAA1683Q9H0B3 1180 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 WHRNQ9P202 907 aa10.67□□□□□ -0.7
LIG3-201ENST00000262327 CPSF2Q9P2I0 782 aaKnown RBP10.67□□□□□ -0.7
LIG3-201ENST00000262327 IQCA1LA6NCM1 817 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 DIAPH2O60879 1101 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 GAS8O95995 478 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 ITIH2P19823 946 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 GBP1P32455 592 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 DSG3P32926 999 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 DMP1Q13316 513 aaPredicted RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 P3H1Q32P28 736 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 ZNF568Q3ZCX4 644 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 FAM160B2Q86V87 743 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 SULF1Q8IWU6 871 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 CKAP2Q8WWK9 683 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 CLEC4DQ8WXI8 215 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 LPAR1Q92633 364 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 CEP170P1Q96L14 293 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 TMEM237Q96Q45 408 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 ROPN1BQ9BZX4 212 aaPredicted RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 ROPN1Q9HAT0 212 aaPredicted RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 AS3MTQ9HBK9 375 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 OAS1P00973 400 aaKnown RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 SLC8A1P32418 973 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 EPHX2P34913 555 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 NSFP46459 744 aaKnown RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 COPS2P61201 443 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 CYP24A1Q07973 514 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 MYBPC2Q14324 1141 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 TMEM63BQ5T3F8 832 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 ERICH1Q86X53 443 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 KCTD17Q8N5Z5 321 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 C12orf50Q8NA57 414 aaPredicted RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 ARMC2Q8NEN0 867 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 SYTL5Q8TDW5 730 aaPredicted RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 FAM210AQ96ND0 272 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 SH3GL3Q99963 347 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 CCDC134Q9H6E4 229 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 SAYSD1Q9NPB0 183 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 GPC3P51654 580 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 TMEM270Q6UE05 265 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 ECHDC2Q86YB7 292 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 ANKLE1Q8NAG6 615 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 ATL2Q8NHH9 583 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 SPIRE2Q8WWL2 714 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 KLRG1Q96E93 195 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 ZBTB45Q96K62 511 aaPredicted RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 RBM15Q96T37 977 aaKnown RBP eCLIP10.66□□□□□ -0.7
LIG3-201ENST00000262327 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 PLVAPQ9BX97 442 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 C12orf65Q9H3J6 166 aaKnown RBP10.66□□□□□ -0.7
LIG3-201ENST00000262327 PICK1Q9NRD5 415 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 NKIRAS1Q9NYS0 192 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 GABBR1Q9UBS5 961 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 FEM1BQ9UK73 627 aa10.66□□□□□ -0.7
LIG3-201ENST00000262327 UMODL1Q5DID0 1318 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 MYPNQ86TC9 1320 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 DOCK1Q14185 1865 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 WDR91A4D1P6 747 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 UPP2O95045 317 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 IFNB1P01574 187 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 FDX1P10109 184 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 UNGP13051 313 aaPredicted RBP10.65□□□□□ -0.7
LIG3-201ENST00000262327 NCKAP1LP55160 1127 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 WDR4P57081 412 aaKnown RBP10.65□□□□□ -0.7
LIG3-201ENST00000262327 RPL7AP62424 266 aaKnown RBP10.65□□□□□ -0.7
LIG3-201ENST00000262327 PTK6Q13882 451 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 ZNF394Q53GI3 561 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 ZBTB41Q5SVQ8 909 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 MORC4Q8TE76 937 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 WNK4Q96J92 1243 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 RMDN3Q96TC7 470 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 PITPNM3Q9BZ71 974 aa10.65□□□□□ -0.7
LIG3-201ENST00000262327 OSBPL8Q9BZF1 889 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms