RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 HLTFQ14527 1009 aaKnown RBP eCLIP14.48□□□□□ -0.09
VMP1-201ENST00000262291 ZNF484Q5JVG2 852 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 MARCH8Q5T0T0 291 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 GTF3C2Q8WUA4 911 aaPredicted RBP14.48□□□□□ -0.09
VMP1-201ENST00000262291 ZSWIM1Q9BR11 485 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 JPH2Q9BR39 696 aaPredicted RBP14.48□□□□□ -0.09
VMP1-201ENST00000262291 DONSONQ9NYP3 566 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 GTF3C4Q9UKN8 822 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 ATP8B3O60423 1300 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 O00370 1275 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 PPFIA4O75335 1185 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 ASS1P00966 412 aaKnown RBP14.48□□□□□ -0.09
VMP1-201ENST00000262291 STAG3L1P0CL83 205 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 IBSPP21815 317 aaPredicted RBP14.48□□□□□ -0.09
VMP1-201ENST00000262291 PROZP22891 400 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 PHKA2P46019 1235 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 ZNF699Q32M78 642 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 SWT1Q5T5J6 900 aaKnown RBP14.48□□□□□ -0.09
VMP1-201ENST00000262291 IFT20Q8IY31 132 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 KIAA0319LQ8IZA0 1049 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 ZDHHC14Q8IZN3 488 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 RASGEF1CQ8N431 466 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 RPF1Q9H9Y2 349 aaKnown RBP14.48□□□□□ -0.09
VMP1-201ENST00000262291 CDHR5Q9HBB8 845 aa14.48□□□□□ -0.09
VMP1-201ENST00000262291 MAPK4P31152 587 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 GGCXP38435 758 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 FAM110CQ1W6H9 321 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 DUSP28Q4G0W2 176 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 JADE1Q6IE81 842 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 CNPY4Q8N129 248 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 PDZD7Q9H5P4 517 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 CISHQ9NSE2 258 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 USTQ9Y2C2 406 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 RNF40O75150 1001 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 HNRNPH1P31943 449 aaKnown RBP14.47□□□□□ -0.09
VMP1-201ENST00000262291 SSR1P43307 286 aaKnown RBP14.47□□□□□ -0.09
VMP1-201ENST00000262291 BEX3Q00994 111 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 TNFAIP2Q03169 654 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 TAF1CQ15572 869 aaPredicted RBP14.47□□□□□ -0.09
VMP1-201ENST00000262291 AMHR2Q16671 573 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 C11orf63Q6NUN7 778 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 DPH6Q7L8W6 267 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 NEUROG2Q9H2A3 272 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 GDF3Q9NR23 364 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 SLC45A1Q9Y2W3 748 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 MROH7Q68CQ1 1323 aa14.47□□□□□ -0.09
VMP1-201ENST00000262291 A0A087WUV0 522 aaPredicted RBP14.46□□□□□ -0.09
VMP1-201ENST00000262291 RBM47A0AV96 593 aaKnown RBP14.46□□□□□ -0.09
VMP1-201ENST00000262291 CES2O00748 559 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 DAPK3O43293 454 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 CCT5P48643 541 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 ZNF200P98182 395 aaPredicted RBP14.46□□□□□ -0.09
VMP1-201ENST00000262291 PPARDQ03181 441 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 ABRAQ8N0Z2 381 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 ZNF606Q8WXB4 792 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 TFAP2BQ92481 460 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 ADAM22Q9P0K1 906 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 SIX4Q9UIU6 781 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 KAT6AQ92794 2004 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 TNNC2P02585 160 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 ITGB3P05106 788 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 HIC1Q14526 733 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 WDR72Q3MJ13 1102 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 OLFML2BQ68BL8 750 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 EXOC8Q8IYI6 725 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 UBL4BQ8N7F7 174 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 C1orf131Q8NDD1 294 aaKnown RBP14.46□□□□□ -0.09
VMP1-201ENST00000262291 KCNN1Q92952 543 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 C18orf8Q96DM3 657 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 ABHD16BQ9H3Z7 469 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 KLHL11Q9NVR0 708 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 HMGXB4Q9UGU5 601 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 TNFSF13BQ9Y275 285 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 HES2Q9Y543 173 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 PPME1Q9Y570 386 aa14.46□□□□□ -0.09
VMP1-201ENST00000262291 CPP00450 1065 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 CD19P15391 556 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 TMOD1P28289 359 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 PEX5P50542 639 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 CDR1P51861 262 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 NOMO3P69849 1222 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 GLE1Q53GS7 698 aaKnown RBP14.45□□□□□ -0.1
VMP1-201ENST00000262291 LINC01465Q8N7H1 131 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 C1orf127Q8N9H9 656 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 FAM71BQ8TC56 605 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 ANKRD36BP1Q96IX9 119 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 NIF3L1Q9GZT8 377 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 XYLT2Q9H1B5 865 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 SMYD3Q9H7B4 428 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 PRMT7Q9NVM4 692 aaPredicted RBP14.45□□□□□ -0.1
VMP1-201ENST00000262291 AGPSO00116 658 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 SYF2O95926 243 aaKnown RBP14.45□□□□□ -0.1
VMP1-201ENST00000262291 CYP1A1P04798 512 aaPredicted RBP14.45□□□□□ -0.1
VMP1-201ENST00000262291 TBXAS1P24557 533 aaPredicted RBP14.45□□□□□ -0.1
VMP1-201ENST00000262291 FLT3P36888 993 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 EPHB4P54760 987 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 BPIFB4P59827 614 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 FKBP1BP68106 108 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 DGKDQ16760 1214 aa14.45□□□□□ -0.1
VMP1-201ENST00000262291 CYP4A22Q5TCH4 519 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms