RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 TRAPPC11Q7Z392 1133 aa20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 METTL23Q86XA0 190 aa20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 B3GALT6Q96L58 329 aa20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 KLHL5Q96PQ7 755 aa20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 POP1Q99575 1024 aaKnown RBP20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 RXFP1Q9HBX9 757 aa20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 METTL14Q9HCE5 456 aaKnown RBP20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 CLDND1Q9NY35 253 aa20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 RWDD2AQ9UIY3 292 aa20.21■□□□□ 0.83
CYSTM1-201ENST00000261811 TRIM49BA6NDI0 452 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 KPNA7A9QM74 516 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 I3L4J1 428 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 LILRB3O75022 631 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 GNA14O95837 355 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 C1RP00736 705 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 CNPP09543 421 aaKnown RBP20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 TKTP29401 623 aaKnown RBP20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 AARSP49588 968 aaKnown RBP eCLIP20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 CLDN10P78369 228 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 TPD52L1Q16890 204 aaPredicted RBP20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 RTP2Q5QGT7 225 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 FILIP1Q7Z7B0 1213 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 OR5B17Q8NGF7 314 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 CASP10Q92851 521 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 SENP8Q96LD8 212 aa20.2■□□□□ 0.82
CYSTM1-201ENST00000261811 SPDYE4A6NLX3 237 aa20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 LRRIQ3A6PVS8 624 aaPredicted RBP20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 CLASP2O75122 1294 aaKnown RBP20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 CLSTN1O94985 981 aa20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 TYMPP19971 482 aa20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 PMS1P54277 932 aaKnown RBP20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 YWHAHQ04917 246 aaPredicted RBP20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 ADAM15Q13444 863 aa20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 SKOR2Q2VWA4 1001 aaPredicted RBP20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 CCDC40Q4G0X9 1142 aa20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 VARS2Q5ST30 1063 aaKnown RBP20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 ZNF280DQ6N043 979 aa20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 LNX1Q8TBB1 728 aaPredicted RBP20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 ARMCX3Q9UH62 379 aaPredicted RBP20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 BACE2Q9Y5Z0 518 aa20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 TSC2P49815 1807 aa20.19■□□□□ 0.82
CYSTM1-201ENST00000261811 BRWD1Q9NSI6 2320 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 CYB561D2O14569 222 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 TEX28O15482 410 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 HUS1O60921 280 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 LETM1O95202 739 aaPredicted RBP20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 ATICP31939 592 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 GTF2H1P32780 548 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 STX17P56962 302 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 TTI2Q6NXR4 508 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 PRSS55Q6UWB4 352 aaPredicted RBP20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 RBM43Q6ZSC3 357 aaKnown RBP20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 ZC3H3Q8IXZ2 948 aaKnown RBP20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 THEM5Q8N1Q8 247 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 CCDC150Q8NCX0 1101 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 HPDLQ96IR7 371 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 UBE2ZQ9H832 354 aaPredicted RBP20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 THEGQ9P2T0 379 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 MTRRQ9UBK8 725 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 PTPRJQ12913 1337 aa20.18■□□□□ 0.82
CYSTM1-201ENST00000261811 PPEF2O14830 753 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 GLUD1P00367 558 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 CCDC192P0DO97 292 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 ERCC5P28715 1186 aaPredicted RBP20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 CTC1Q2NKJ3 1217 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 KLHL40Q2TBA0 621 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 CTXN3Q4LDR2 81 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 TCERG1LQ5VWI1 586 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 OVOS1Q6IE37 1185 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 LLGL2Q6P1M3 1020 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 FRMD5Q7Z6J6 570 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 EEF2KMTQ96G04 330 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 IMPG2Q9BZV3 1241 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 DZANK1Q9NVP4 752 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 HCFC2Q9Y5Z7 792 aa20.17■□□□□ 0.82
CYSTM1-201ENST00000261811 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 HOXB8P17481 243 aaPredicted RBP20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 IGFBP6P24592 240 aaPredicted RBP20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 GTF2F1P35269 517 aaKnown RBP eCLIP20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 CLCN4P51793 760 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 DLG4P78352 724 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 COL19A1Q14993 1142 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 CAVIN1Q6NZI2 390 aaKnown RBP20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 TMEM184AQ6ZMB5 413 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 DPH6Q7L8W6 267 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 TMEM86AQ8N2M4 240 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 HDAC7Q8WUI4 952 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 ZNF516Q92618 1163 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 DUSP9Q99956 384 aaKnown RBP20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 SRRTQ9BXP5 876 aaKnown RBP20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 ANO10Q9NW15 660 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 GDAP2Q9NXN4 497 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 SIX4Q9UIU6 781 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 FAM50BQ9Y247 325 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 SNX9Q9Y5X1 595 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 CDY1Q9Y6F8 540 aa20.16■□□□□ 0.82
CYSTM1-201ENST00000261811 OR6C75A6NL08 312 aa20.15■□□□□ 0.82
CYSTM1-201ENST00000261811 OAZ2O95190 189 aa20.15■□□□□ 0.82
CYSTM1-201ENST00000261811 C4BPAP04003 597 aaKnown RBP20.15■□□□□ 0.82
CYSTM1-201ENST00000261811 CYP11A1P05108 521 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms