RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 NUP107P57740 925 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 OCRLQ01968 901 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
TMEM260-201ENST00000261556 PGM2Q96G03 612 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 HEPHQ9BQS7 1158 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 PLAGL2Q9UPG8 496 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 PP2D1A8MPX8 630 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 PDGFRBP09619 1106 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 HMOX2P30519 316 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 CASP5P51878 434 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 FOXD4Q12950 439 aaPredicted RBP13.64□□□□□ -0.23
TMEM260-201ENST00000261556 SGO2Q562F6 1265 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 RARS2Q5T160 578 aaKnown RBP13.64□□□□□ -0.23
TMEM260-201ENST00000261556 DGKHQ86XP1 1220 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 CCDC117Q8IWD4 279 aaPredicted RBP13.64□□□□□ -0.23
TMEM260-201ENST00000261556 VPS50Q96JG6 964 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 NSMCE3Q96MG7 304 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 ZNF577Q9BSK1 485 aa13.64□□□□□ -0.23
TMEM260-201ENST00000261556 LOC100653049A0A140TA62 436 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 KRT34O76011 436 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 PPARGP37231 505 aaPredicted RBP13.63□□□□□ -0.23
TMEM260-201ENST00000261556 ANKRD20A4Q4UJ75 823 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 PPM1KQ8N3J5 372 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 RSPH1Q8WYR4 309 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 ADPGKQ9BRR6 497 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 VPS51Q9UID3 782 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 RABGEF1Q9UJ41 708 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 CROCC2H7BZ55 1655 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 USP31Q70CQ4 1352 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 RNF17Q9BXT8 1623 aaKnown RBP13.63□□□□□ -0.23
TMEM260-201ENST00000261556 A0A087X0T9 212 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 C15orf38-AP3S2A0A0A6YYH1 394 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 ASNSP08243 561 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 PAEPP09466 180 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 FAM228BP0C875 321 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 CCNA1P78396 465 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
TMEM260-201ENST00000261556 TMTC4Q5T4D3 741 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 ARPINQ7Z6K5 226 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 EXOC3L1Q86VI1 746 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 OSCP1Q8WVF1 389 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 LARP4BQ92615 738 aaKnown RBP13.63□□□□□ -0.23
TMEM260-201ENST00000261556 SCHIP1Q9P0W5 487 aaPredicted RBP13.63□□□□□ -0.23
TMEM260-201ENST00000261556 CSPG5O95196 566 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 SMARCA1P28370 1054 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 SLC5A3P53794 718 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
TMEM260-201ENST00000261556 LMNB2Q03252 620 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 MTFR1Q15390 333 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 C11orf74Q86VG3 221 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 PNPLA6Q8IY17 1366 aa13.63□□□□□ -0.23
TMEM260-201ENST00000261556 SERPINB1P30740 379 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 PBX1P40424 430 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 CRKP46108 304 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 RPS6P62753 249 aaKnown RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 ARHGAP4P98171 946 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 NAB2Q15742 525 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 KLHDC10Q6PID8 442 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 LVRNQ6Q4G3 990 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 CKAP2Q8WWK9 683 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 HDAC2Q92769 488 aaKnown RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 MED15Q96RN5 788 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 SAYSD1Q9NPB0 183 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 STRIP2Q9ULQ0 834 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 PODXLO00592 558 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 FOXD2O60548 495 aaPredicted RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 PLEKHA8P1O95397 391 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 FCER1AP12319 257 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 YARSP54577 528 aaKnown RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 TUBA1BP68363 451 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 MTM1Q13496 603 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 LRP8Q14114 963 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 SCARF1Q14162 830 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 UBE2SQ16763 222 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 TUBA1AQ71U36 451 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 DDI1Q8WTU0 396 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 CLPTM1LQ96KA5 538 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 CITED4Q96RK1 184 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 NRBP2Q9NSY0 501 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 HNRNPDLO14979 420 aaKnown RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 SEMA3DO95025 777 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 HOXA13P31271 388 aaPredicted RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 MXI1P50539 228 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 SNAP25P60880 206 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 TMPRSS15P98073 1019 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 AUHQ13825 339 aaKnown RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 RGS21Q2M5E4 152 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 SMUG1Q53HV7 270 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 C1orf54Q8WWF1 131 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 ZNF341Q9BYN7 854 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 MARCH7Q9H992 704 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 TYW1Q9NV66 732 aaKnown RBP13.62□□□□□ -0.23
TMEM260-201ENST00000261556 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
TMEM260-201ENST00000261556 MEIS1O00470 390 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms