RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 BRD2P25440 801 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 SFNP31947 248 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PTGIRP43119 386 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CYP24A1Q07973 514 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 NCOA4Q13772 614 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PPP2R5DQ14738 602 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CLEC16AQ2KHT3 1053 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PREPLQ4J6C6 727 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 MDH1BQ5I0G3 518 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PCNX4Q63HM2 1172 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 TATDN1Q6P1N9 297 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 DARS2Q6PI48 645 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 LVRNQ6Q4G3 990 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ENOSF1Q7L5Y1 443 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CCHCR1Q8TD31 782 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SYTL5Q8TDW5 730 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 FAM151AQ8WW52 585 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SPOCK2Q92563 424 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ART4Q93070 314 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ATG4CQ96DT6 458 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ZBTB45Q96K62 511 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 MBOAT7Q96N66 472 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 YY1AP1Q9H869 796 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 AGO4Q9HCK5 861 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 PARVAQ9NVD7 372 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 GGA2Q9UJY4 613 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 DNPEPQ9ULA0 475 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PHTF1Q9UMS5 762 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 HEY1Q9Y5J3 304 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ZMYM2Q9UBW7 1377 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ARHGAP42A6NI28 874 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 H0YCG3 227 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PIK3CDO00329 1044 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 MCF2LO15068 1137 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 BANF1O75531 89 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 DCTN3O75935 186 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CBX6O95503 412 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 GHRP10912 638 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 POLR2BP30876 1174 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 HSPA1LP34931 641 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ARL4CP56559 192 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 TTLL12Q14166 644 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 KRT81Q14533 505 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SLC15A2Q16348 729 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PKN2Q16513 984 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 MIS18BP1Q6P0N0 1132 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 C6orf89Q6UWU4 347 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 C3orf62Q6ZUJ4 267 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 APBB1IPQ7Z5R6 666 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 LONP2Q86WA8 852 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PPM1NQ8N819 430 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CCDC110Q8TBZ0 833 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SENP7Q9BQF6 1050 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SLC13A1Q9BZW2 595 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 JPH1Q9HDC5 661 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 NGRNQ9NPE2 291 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 DMAC2Q9NW81 257 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 TXNDC16Q9P2K2 825 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SLC9A2Q9UBY0 812 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 MARCOQ9UEW3 520 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 IP6K2Q9UHH9 426 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CHMP2BQ9UQN3 213 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SPDYE2BA6NHP3 402 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SRRM3A6NNA2 597 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 ENO4A6NNW6 628 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 O00370 1275 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 GYG2O15488 501 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CST8O60676 142 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 DGAT1O75907 488 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 DNAJC8O75937 253 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 PROSCO94903 275 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 COL4A1P02462 1669 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 TNNC2P02585 160 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 KRT16P08779 473 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 SPDYE6P0CI01 402 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ESRRAP11474 423 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 PECAM1P16284 738 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 CHRNB2P17787 502 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CAP2P40123 477 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CPA2P48052 419 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 HMGCS2P54868 508 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 TAS2R40P59535 323 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PSMC1P62191 440 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 XRCC4Q13426 336 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 MFSD7Q6UXD7 560 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 MYH14Q7Z406 1995 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 SLC9A9Q8IVB4 645 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 KCTD17Q8N5Z5 321 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 FEZF2Q8TBJ5 459 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 PLEKHO2Q8TD55 490 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 NSUN6Q8TEA1 469 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 CENPTQ96BT3 561 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 CYTH2Q99418 400 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 MOV10L1Q9BXT6 1211 aaKnown RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 FHDC1Q9C0D6 1143 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 COL20A1Q9P218 1284 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 FBXO40Q9UH90 709 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 MAGED2Q9UNF1 606 aaPredicted RBP5.01□□□□□ -1.61
USP44-201ENST00000258499 AGAP1Q9UPQ3 857 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 IRS2Q9Y4H2 1338 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms