RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 WNT10BO00744 389 aa17.8■□□□□ 0.44
SORT1-201ENST00000256637 MGEA5O60502 916 aa17.8■□□□□ 0.44
SORT1-201ENST00000256637 DGAT1O75907 488 aa17.8■□□□□ 0.44
SORT1-201ENST00000256637 ERVK-10P10266 1014 aa17.8■□□□□ 0.44
SORT1-201ENST00000256637 CXCL17Q6UXB2 119 aa17.8■□□□□ 0.44
SORT1-201ENST00000256637 C10orf53Q8N6V4 93 aa17.8■□□□□ 0.44
SORT1-201ENST00000256637 RPRD1AQ96P16 312 aaPredicted RBP17.8■□□□□ 0.44
SORT1-201ENST00000256637 MED15Q96RN5 788 aa17.8■□□□□ 0.44
SORT1-201ENST00000256637 NT5C1AQ9BXI3 368 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 TMEM88BA6NKF7 163 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 THP07101 528 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 ACO1P21399 889 aaKnown RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 MDM2Q00987 491 aaPredicted RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 GRIK4Q16099 956 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 C2CD6Q53TS8 623 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 BCAP29Q9UHQ4 241 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 A0A0G2JND7 137 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 COPEO14579 308 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 ICAM1P05362 532 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 ITGB6P18564 788 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 PHKG1Q16816 387 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 MMS22LQ6ZRQ5 1243 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 USP50Q70EL3 339 aaPredicted RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 ZNF614Q8N883 585 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 SPATA18Q8TC71 538 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 TRPM4Q8TD43 1214 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 ZNF512BQ96KM6 892 aaPredicted RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 POP1Q99575 1024 aaKnown RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 TRIM62Q9BVG3 475 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 SPZ1Q9BXG8 430 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 PXMP2Q9NR77 195 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 THG1LQ9NWX6 298 aaKnown RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 SUN2Q9UH99 717 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 PLA2G4CQ9UP65 541 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 HMOX2P30519 316 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 ATG16L1Q676U5 607 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 ARL8AQ96BM9 186 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 CCDC138Q96M89 665 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 FRMD3A2A2Y4 597 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 STXBP3O00186 592 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 DIAPH2O60879 1101 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 TAF6P49848 677 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 PDIA2Q13087 525 aaKnown RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 ADGRF2Q8IZF7 708 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 ZMYND8Q9ULU4 1186 aaPredicted RBP17.79■□□□□ 0.44
SORT1-201ENST00000256637 ARHGEF40Q8TER5 1519 aa17.79■□□□□ 0.44
SORT1-201ENST00000256637 KIAA1324Q6UXG2 1013 aaKnown RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 ZBED8Q8IZ13 594 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 PURBQ96QR8 312 aaKnown RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 SYN1P17600 705 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 ACVR2BQ13705 512 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 LMNTD2Q8IXW0 634 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 ZMYND12Q9H0C1 365 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 PDE11AQ9HCR9 933 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 JRKLQ9Y4A0 524 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 MAPK13O15264 365 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 ATP1A1P05023 1023 aaKnown RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 ASAP3Q8TDY4 903 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 SCG3Q8WXD2 468 aaKnown RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 TMEM117Q9H0C3 514 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 SYTL2Q9HCH5 934 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 SLC12A8A0AV02 714 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 M0QYT0 321 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 NDUFA10O95299 355 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 ARP10275 920 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 ACAT1P24752 427 aaKnown RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 POLD3Q15054 466 aaPredicted RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 ITPRIPL1Q6GPH6 555 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 CES5AQ6NT32 575 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 DHX40Q8IX18 779 aaKnown RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 RIN2Q8WYP3 895 aaPredicted RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 HIST1H2AGP0C0S8 130 aaPredicted RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 CHRM3P20309 590 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 HIST1H2ADP20671 130 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 ERAP2Q6P179 960 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 BLOC1S5Q8TDH9 187 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 HIST1H2AHQ96KK5 128 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 HIST1H2AJQ99878 128 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 H2AFJQ9BTM1 129 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 MROH8Q9H579 483 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 MAD2L2Q9UI95 211 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 PPRC1Q5VV67 1664 aaKnown RBP17.78■□□□□ 0.44
SORT1-201ENST00000256637 F5H5T6 163 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 PCSK1P29120 753 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 TRPV6Q9H1D0 765 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 NEXMIFQ5QGS0 1516 aa17.78■□□□□ 0.44
SORT1-201ENST00000256637 GOLGA8KD6RF30 607 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 ERVK-9P63128 1117 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 ERVK-24P63145 666 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 PPP1R2P3Q6NXS1 205 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 PBKQ96KB5 322 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 MYOCQ99972 504 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 APRTP07741 180 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 SLC11A2P49281 568 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 IKBKEQ14164 716 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 RBBP8NLQ8NC74 664 aaPredicted RBP17.77■□□□□ 0.44
SORT1-201ENST00000256637 PYCARDQ9ULZ3 195 aa17.77■□□□□ 0.44
SORT1-201ENST00000256637 NOVA2Q9UNW9 492 aaKnown RBP17.77■□□□□ 0.44
SORT1-201ENST00000256637 CAPZA2P47755 286 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms