RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 TAS1R2Q8TE23 839 aa13.01□□□□□ -0.33
NIP7-201ENST00000254940 APBB2Q92870 758 aa13.01□□□□□ -0.33
NIP7-201ENST00000254940 ZBTB9Q96C00 473 aa13.01□□□□□ -0.33
NIP7-201ENST00000254940 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.01□□□□□ -0.33
NIP7-201ENST00000254940 PACSIN1Q9BY11 444 aa13.01□□□□□ -0.33
NIP7-201ENST00000254940 TMEM117Q9H0C3 514 aa13.01□□□□□ -0.33
NIP7-201ENST00000254940 CEP72Q9P209 647 aa13.01□□□□□ -0.33
NIP7-201ENST00000254940 FNDC1Q4ZHG4 1894 aaPredicted RBP13□□□□□ -0.33
NIP7-201ENST00000254940 ZC3H11AO75152 810 aaKnown RBP eCLIP13□□□□□ -0.33
NIP7-201ENST00000254940 LDHAP00338 332 aaKnown RBP13□□□□□ -0.33
NIP7-201ENST00000254940 ITGB3P05106 788 aa13□□□□□ -0.33
NIP7-201ENST00000254940 TMEM191BP0C7N4 346 aa13□□□□□ -0.33
NIP7-201ENST00000254940 HNRNPH3P31942 346 aaKnown RBP13□□□□□ -0.33
NIP7-201ENST00000254940 RFC2P35250 354 aa13□□□□□ -0.33
NIP7-201ENST00000254940 FMO5P49326 533 aa13□□□□□ -0.33
NIP7-201ENST00000254940 PSMD6Q15008 389 aa13□□□□□ -0.33
NIP7-201ENST00000254940 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.33
NIP7-201ENST00000254940 PHLDB3Q6NSJ2 640 aa13□□□□□ -0.33
NIP7-201ENST00000254940 JAKMIP2Q96AA8 810 aa13□□□□□ -0.33
NIP7-201ENST00000254940 RNPC3Q96LT9 517 aaKnown RBP13□□□□□ -0.33
NIP7-201ENST00000254940 PSMB7Q99436 277 aa13□□□□□ -0.33
NIP7-201ENST00000254940 HAUS4Q9H6D7 363 aa13□□□□□ -0.33
NIP7-201ENST00000254940 CERS4Q9HA82 394 aa13□□□□□ -0.33
NIP7-201ENST00000254940 CGNQ9P2M7 1197 aaKnown RBP13□□□□□ -0.33
NIP7-201ENST00000254940 CAPN6Q9Y6Q1 641 aa13□□□□□ -0.33
NIP7-201ENST00000254940 A0A087X0T9 212 aa13□□□□□ -0.33
NIP7-201ENST00000254940 GOLGA6L9A6NEM1 432 aa13□□□□□ -0.33
NIP7-201ENST00000254940 SLC16A3O15427 465 aaKnown RBP13□□□□□ -0.33
NIP7-201ENST00000254940 AMHP03971 560 aa13□□□□□ -0.33
NIP7-201ENST00000254940 FAM228BP0C875 321 aa13□□□□□ -0.33
NIP7-201ENST00000254940 PTK2Q05397 1052 aa13□□□□□ -0.33
NIP7-201ENST00000254940 PTPROQ16827 1216 aa13□□□□□ -0.33
NIP7-201ENST00000254940 ASTE1Q2TB18 679 aaPredicted RBP13□□□□□ -0.33
NIP7-201ENST00000254940 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
NIP7-201ENST00000254940 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
NIP7-201ENST00000254940 IQCEQ6IPM2 695 aa13□□□□□ -0.33
NIP7-201ENST00000254940 GLB1LQ6UWU2 654 aa13□□□□□ -0.33
NIP7-201ENST00000254940 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
NIP7-201ENST00000254940 SCARA5Q6ZMJ2 495 aa13□□□□□ -0.33
NIP7-201ENST00000254940 INTS8Q75QN2 995 aaKnown RBP13□□□□□ -0.33
NIP7-201ENST00000254940 SV2AQ7L0J3 742 aa13□□□□□ -0.33
NIP7-201ENST00000254940 MRPL10Q7Z7H8 261 aaKnown RBP13□□□□□ -0.33
NIP7-201ENST00000254940 KCNN1Q92952 543 aa13□□□□□ -0.33
NIP7-201ENST00000254940 PCDHA13Q9Y5I0 950 aa13□□□□□ -0.33
NIP7-201ENST00000254940 MRFAP1Q9Y605 127 aa13□□□□□ -0.33
NIP7-201ENST00000254940 SLC4A7Q9Y6M7 1214 aa13□□□□□ -0.33
NIP7-201ENST00000254940 GBF1Q92538 1859 aa13□□□□□ -0.33
NIP7-201ENST00000254940 PDCD11Q14690 1871 aaKnown RBP12.99□□□□□ -0.33
NIP7-201ENST00000254940 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
NIP7-201ENST00000254940 BUB1O43683 1085 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 ARHGEF15O94989 841 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 ATP1A1P05023 1023 aaKnown RBP12.99□□□□□ -0.33
NIP7-201ENST00000254940 ITGB1P05556 798 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 CAPN2P17655 700 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 SCP2P22307 547 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 POLR2BP30876 1174 aaKnown RBP12.99□□□□□ -0.33
NIP7-201ENST00000254940 CYLC1P35663 651 aaPredicted RBP12.99□□□□□ -0.33
NIP7-201ENST00000254940 PBX2P40425 430 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 FAM189BP81408 668 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 NFIL3Q16649 462 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 ARHGAP44Q17R89 818 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 APBB1IPQ7Z5R6 666 aaPredicted RBP12.99□□□□□ -0.33
NIP7-201ENST00000254940 C1orf127Q8N9H9 656 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 LMO3Q8TAP4 145 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 PGBD4Q96DM1 585 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 B3GALT6Q96L58 329 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 YME1L1Q96TA2 773 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
NIP7-201ENST00000254940 CGRRF1Q99675 332 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 TBC1D13Q9NVG8 400 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 VNN1O95497 513 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 RAB27AP51159 221 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 CLCNKBP51801 687 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 MYL6P60660 151 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 SNRPFP62306 86 aaKnown RBP12.99□□□□□ -0.33
NIP7-201ENST00000254940 MYL7Q01449 175 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 NOMO2Q5JPE7 1267 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 ALKAL1Q6UXT8 129 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 CASD1Q96PB1 797 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 SPAG5Q96R06 1193 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 GPR88Q9GZN0 384 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 C1orf112Q9NSG2 853 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 DPP3Q9NY33 737 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 AGAP1Q9UPQ3 857 aa12.99□□□□□ -0.33
NIP7-201ENST00000254940 ZNF185O15231 689 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 ZNF623O75123 536 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 MOCS3O95396 460 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 PARNO95453 639 aaKnown RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 ATP2A2P16615 1042 aaKnown RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 PIK3CAP42336 1068 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 OR1G1P47890 313 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 MXI1P50539 228 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 TRAPPC11Q7Z392 1133 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 ZNF571Q7Z3V5 609 aaPredicted RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 IRF2BP2Q7Z5L9 587 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 TMEM173Q86WV6 379 aaPredicted RBP12.98□□□□□ -0.33
NIP7-201ENST00000254940 PALB2Q86YC2 1186 aa12.98□□□□□ -0.33
NIP7-201ENST00000254940 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms