RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 A0A1B0GTH6 734 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 GMNCA6NCL1 334 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 HUNKP57058 714 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 GLB1LQ6UWU2 654 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 PGBD3Q8N328 593 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 KRT35Q92764 455 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 NAF1Q96HR8 494 aaKnown RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ZNF512Q96ME7 567 aaPredicted RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 A0A1W2PQJ5 194 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 MAFGO15525 162 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 GTF2H1P32780 548 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 PPP3CCP48454 512 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 HARS2P49590 506 aaKnown RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ARL4DP49703 201 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ALDH18A1P54886 795 aaKnown RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 TMEM259Q4ZIN3 620 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 CYP4A22Q5TCH4 519 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 PKN3Q6P5Z2 889 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 INTS5Q6P9B9 1019 aaKnown RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ZNF507Q8TCN5 953 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 BTBD6Q96KE9 485 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 RIT2Q99578 217 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 FAM49BQ9NUQ9 324 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 AIPL1Q9NZN9 384 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 GPR75-ASB3A0A0A6YYF3 556 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 GFAPP14136 432 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 BRD2P25440 801 aaKnown RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 CYP2C19P33261 490 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 PEX19P40855 299 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 PNPLA4P41247 253 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 KLK7P49862 253 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 TRADDQ15628 312 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 SLC18A3Q16572 532 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 HIBCHQ6NVY1 386 aaPredicted RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ZNF677Q86XU0 584 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 DAGLBQ8NCG7 672 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ATG4CQ96DT6 458 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 KCNH7Q9NS40 1196 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ANKEF1Q9NU02 776 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 DOLKQ9UPQ8 538 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ANTXR2P58335 489 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 TTC39BQ5VTQ0 682 aaPredicted RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ING2Q9H160 280 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ZFATQ9P243 1243 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 AK9Q5TCS8 1911 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 KCNA4P22459 653 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ETFBP38117 255 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 C10orf120Q5SQS8 335 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 CHCHD3Q9NX63 227 aaKnown RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 CD274Q9NZQ7 290 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 SELENONQ9NZV5 590 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 SNX5Q9Y5X3 404 aa9.14□□□□□ -0.95
PTCD3-201ENST00000254630 ZNF197O14709 1029 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 CCDC22O60826 627 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 NDUFS3O75489 264 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 GRAP2O75791 330 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 ARIH2O95376 493 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 ITGB3P05106 788 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 KLRK1P26718 216 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 THPOP40225 353 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 SLC15A2Q16348 729 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 KIZQ2M2Z5 673 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 DPF2Q92785 391 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 PTPRN2Q92932 1015 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 ZKSCAN4Q969J2 545 aaPredicted RBP9.13□□□□□ -0.95
PTCD3-201ENST00000254630 HPDLQ96IR7 371 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 CINPQ9BW66 212 aaPredicted RBP9.13□□□□□ -0.95
PTCD3-201ENST00000254630 AAASQ9NRG9 546 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.13□□□□□ -0.95
PTCD3-201ENST00000254630 TBX20Q9UMR3 447 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 HIST1H2AGP0C0S8 130 aaPredicted RBP9.13□□□□□ -0.95
PTCD3-201ENST00000254630 UCHL3P15374 230 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 HIST1H2ADP20671 130 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 PCSK1P29120 753 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 RFWD2Q8NHY2 731 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 HIST1H2AHQ96KK5 128 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 FAM161BQ96MY7 647 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 HIST1H2AJQ99878 128 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 H2AFJQ9BTM1 129 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 C20orf96Q9NUD7 363 aaPredicted RBP9.13□□□□□ -0.95
PTCD3-201ENST00000254630 MYL2P10916 166 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 MDH1BQ5I0G3 518 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 EFHC1Q5JVL4 640 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 SPDYAQ5MJ70 313 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 GPAT2Q6NUI2 795 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 PLEKHH3Q7Z736 793 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 TRIM51Q9BSJ1 452 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 TRABDQ9H4I3 376 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 SENP2Q9HC62 589 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 AMACRQ9UHK6 382 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 GPR182O15218 404 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 TAF6P49848 677 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 FLOT2Q14254 428 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 ACBD5Q5T8D3 534 aaPredicted RBP9.13□□□□□ -0.95
PTCD3-201ENST00000254630 CATSPER3Q86XQ3 398 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 SCFD2Q8WU76 684 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 COLEC11Q9BWP8 271 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 ENTPD7Q9NQZ7 604 aa9.13□□□□□ -0.95
PTCD3-201ENST00000254630 NOP53Q9NZM5 478 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms