RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ABLIM3O94929 683 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 ARPP19P56211 112 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 PPM1LQ5SGD2 360 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 ZNF280DQ6N043 979 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 DSTYKQ6XUX3 929 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 ZDHHC14Q8IZN3 488 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 GPD1LQ8N335 351 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 ZNF461Q8TAF7 563 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 FAM84AQ96KN4 292 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 PIDD1Q9HB75 910 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 CLUHO75153 1309 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 UBE4BO95155 1302 aa24.85■■□□□ 1.57
LSM4-201ENST00000252816 TULP1O00294 542 aaPredicted RBP24.84■■□□□ 1.57
LSM4-201ENST00000252816 CCL16O15467 120 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 OAZ2O95190 189 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 HNRNPA1P09651 372 aaKnown RBP eCLIP24.84■■□□□ 1.57
LSM4-201ENST00000252816 HOXA9P31269 272 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 BMT2Q1RMZ1 405 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 OTOP3Q7RTS5 596 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 NT5DC4Q86YG4 428 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 SENP8Q96LD8 212 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 AGPAT3Q9NRZ7 376 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 HSPBP1Q9NZL4 362 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 LIMD1Q9UGP4 676 aa24.84■■□□□ 1.57
LSM4-201ENST00000252816 KIAA0391O15091 583 aaKnown RBP24.83■■□□□ 1.57
LSM4-201ENST00000252816 TFAMQ00059 246 aaKnown RBP24.83■■□□□ 1.57
LSM4-201ENST00000252816 YWHAHQ04917 246 aaPredicted RBP24.83■■□□□ 1.57
LSM4-201ENST00000252816 PTPN21Q16825 1174 aa24.83■■□□□ 1.57
LSM4-201ENST00000252816 UVSSAQ2YD98 709 aa24.83■■□□□ 1.57
LSM4-201ENST00000252816 KMT5BQ4FZB7 885 aa24.83■■□□□ 1.57
LSM4-201ENST00000252816 CBWD2Q8IUF1 395 aa24.83■■□□□ 1.57
LSM4-201ENST00000252816 EDAQ92838 391 aa24.83■■□□□ 1.57
LSM4-201ENST00000252816 PDE11AQ9HCR9 933 aa24.83■■□□□ 1.57
LSM4-201ENST00000252816 SCN1AP35498 2009 aa24.83■■□□□ 1.56
LSM4-201ENST00000252816 ASGR2P07307 311 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 PRR29P0C7W0 189 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 TYMPP19971 482 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 ZXDAP98168 799 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 STK4Q13043 487 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 SCARA3Q6AZY7 606 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 GRASPQ7Z6J2 395 aaPredicted RBP24.82■■□□□ 1.56
LSM4-201ENST00000252816 PLCD3Q8N3E9 789 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 KIAA0895Q8NCT3 520 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 ACSF2Q96CM8 615 aaPredicted RBP24.82■■□□□ 1.56
LSM4-201ENST00000252816 DOCK6Q96HP0 2047 aa24.82■■□□□ 1.56
LSM4-201ENST00000252816 CLIC2O15247 247 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 ATF2P15336 505 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 PAX3P23760 479 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 NTHL1P78549 312 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 RTL10Q7L3V2 364 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 USP37Q86T82 979 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 C1orf127Q8N9H9 656 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 BORCS6Q96GS4 357 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 MYADMQ96S97 322 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 EXOC1Q9NV70 894 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 TECTAO75443 2155 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 MYO10Q9HD67 2058 aa24.81■■□□□ 1.56
LSM4-201ENST00000252816 ZNF233A6NK53 670 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 SEC24AO95486 1093 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 MYL1P05976 194 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 POU2F2P09086 479 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 OR4Q2P0C623 313 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 ODC1P11926 461 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 TAF6P49848 677 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 KNOP1Q1ED39 458 aaKnown RBP24.8■■□□□ 1.56
LSM4-201ENST00000252816 TPGS2Q68CL5 300 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 OVOS1Q6IE37 1185 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 KRBA2Q6ZNG9 492 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 CXorf38Q8TB03 319 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 POLIQ9UNA4 740 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 PTPRJQ12913 1337 aa24.8■■□□□ 1.56
LSM4-201ENST00000252816 ARHGEF37A1IGU5 675 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 XYLBO75191 536 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 ZNF202O95125 648 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 POLR2BP30876 1174 aaKnown RBP24.79■■□□□ 1.56
LSM4-201ENST00000252816 ELF1P32519 619 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 CYP2J2P51589 502 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 SNRPFP62306 86 aaKnown RBP24.79■■□□□ 1.56
LSM4-201ENST00000252816 LMBRD2Q68DH5 695 aaPredicted RBP24.79■■□□□ 1.56
LSM4-201ENST00000252816 RNF19BQ6ZMZ0 732 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 TCEAL8Q8IYN2 117 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 CACTINQ8WUQ7 758 aaKnown RBP24.79■■□□□ 1.56
LSM4-201ENST00000252816 MTMR12Q9C0I1 747 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 SMOC2Q9H3U7 446 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 CYP4F11Q9HBI6 524 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 HCFC1R1Q9NWW0 138 aa24.79■■□□□ 1.56
LSM4-201ENST00000252816 AFF4Q9UHB7 1163 aaKnown RBP24.79■■□□□ 1.56
LSM4-201ENST00000252816 PRR33A8MZF0 331 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 CYB561D2O14569 222 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 PRRG1O14668 218 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 VNN2O95498 520 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 RPN1P04843 607 aaKnown RBP24.78■■□□□ 1.56
LSM4-201ENST00000252816 ITGB3P05106 788 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 CYP11A1P05108 521 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 CPB1P15086 417 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 GBP2P32456 591 aaPredicted RBP24.78■■□□□ 1.56
LSM4-201ENST00000252816 ADCY1Q08828 1119 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 PSMD2Q13200 908 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 TRIM67Q6ZTA4 783 aa24.78■■□□□ 1.56
LSM4-201ENST00000252816 GET4Q7L5D6 327 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms