RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TAF6P49848 677 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 CYP2J2P51589 502 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 YWHAHQ04917 246 aaPredicted RBP26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 MYBPC2Q14324 1141 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 SNRNP35Q16560 246 aaKnown RBP26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 USP37Q86T82 979 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 CBWD2Q8IUF1 395 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 SLC9A9Q8IVB4 645 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 ANKRD36BP1Q96IX9 119 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 GTPBP4Q9BZE4 634 aaKnown RBP26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 ITGA11Q9UKX5 1188 aa26.31■■□□□ 1.8
SDF2L1-201ENST00000248958 TULP1O00294 542 aaPredicted RBP26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 TBC1D4O60343 1298 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 EXOC3O60645 756 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 PRPF40AO75400 957 aaKnown RBP26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 SMC2O95347 1197 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 TMEM191BP0C7N4 346 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 ODC1P11926 461 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 SSTR3P32745 418 aaPredicted RBP26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 WNT7BP56706 349 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 SV2CQ496J9 727 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 CTXN3Q4LDR2 81 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 LIN9Q5TKA1 542 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 TMC5Q6UXY8 1006 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 GSDMAQ96QA5 445 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 KCTD10Q9H3F6 313 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 DSEQ9UL01 958 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 SCN1AP35498 2009 aa26.3■■□□□ 1.8
SDF2L1-201ENST00000248958 CCDC195A0A1B0GUA6 201 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 PPEF2O14830 753 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 CALUO43852 315 aaPredicted RBP26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 OAZ2O95190 189 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 PNOCQ13519 176 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 UVSSAQ2YD98 709 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 WDR49Q8IV35 697 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 TMEM130Q8N3G9 435 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 GUF1Q8N442 669 aaKnown RBP26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 RDH13Q8NBN7 331 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 ZNF461Q8TAF7 563 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 SENP8Q96LD8 212 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 INTS13Q9NVM9 706 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 FBXL5Q9UKA1 691 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 TRAF3IP3Q9Y228 551 aa26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 R3HCC1Q9Y3T6 440 aaKnown RBP26.29■■□□□ 1.8
SDF2L1-201ENST00000248958 ADAM12O43184 909 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 KINO60870 393 aaKnown RBP26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 ZMYND10O75800 440 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 TNNC2P02585 160 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 SPATA31D3P0C874 917 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 PSMD6Q15008 389 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 DUOXA2Q1HG44 320 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 RSPO2Q6UXX9 243 aaPredicted RBP26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 SPATA31D4Q6ZUB0 917 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 LRRC52Q8N7C0 313 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 C1orf127Q8N9H9 656 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 FNBP1Q96RU3 617 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 DMAC2Q9NW81 257 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 MAFFQ9ULX9 164 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 NR2E1Q9Y466 385 aa26.28■■□□□ 1.8
SDF2L1-201ENST00000248958 C2orf16Q68DN1 1984 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 LOC730098B7Z3J9 87 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 ITGB3P05106 788 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 HNRNPA1P09651 372 aaKnown RBP eCLIP26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 HOXA9P31269 272 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 RBP5P82980 135 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 ROR1Q01973 937 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 CYP24A1Q07973 514 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 TPGS2Q68CL5 300 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 CCDC149Q6ZUS6 474 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 MFSD14AQ96MC6 490 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 PRKD2Q9BZL6 878 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 POMKQ9H5K3 350 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 AGAP1Q9UPQ3 857 aa26.27■■□□□ 1.8
SDF2L1-201ENST00000248958 DENND4AQ7Z401 1863 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 OR6C75A6NL08 312 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 KPNA7A9QM74 516 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 SPTLC1O15269 473 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 ABLIM3O94929 683 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 CYP11A1P05108 521 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 POLR2BP30876 1174 aaKnown RBP26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 UBE2HP62256 183 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 NFIL3Q16649 462 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 OVOS1Q6IE37 1185 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 METTL23Q86XA0 190 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 CSGALNACT2Q8N6G5 542 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 SPATA20Q8TB22 786 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 SMARCE1Q969G3 411 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 CGRRF1Q99675 332 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 MTMR12Q9C0I1 747 aa26.26■■□□□ 1.79
SDF2L1-201ENST00000248958 GADD45BO75293 160 aaPredicted RBP26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 RFPL2O75678 378 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 NR3C1P04150 777 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 C8AP07357 584 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 TNNI1P19237 187 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 ELF1P32519 619 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 PPM1LQ5SGD2 360 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 SMG7Q92540 1137 aaKnown RBP26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 PIDD1Q9HB75 910 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 CD320Q9NPF0 282 aa26.25■■□□□ 1.79
SDF2L1-201ENST00000248958 PCDHA5Q9Y5H7 936 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms