RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 C8AP07357 584 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 HNRNPA1P09651 372 aaKnown RBP eCLIP13.81□□□□□ -0.2
VPREB3-201ENST00000248948 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 OR1D2P34982 312 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 TAF6P49848 677 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 LILRA4P59901 499 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 ROR1Q01973 937 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 FAM160A1Q05DH4 1040 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 STK4Q13043 487 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 SNRNP35Q16560 246 aaKnown RBP13.81□□□□□ -0.2
VPREB3-201ENST00000248948 SV2CQ496J9 727 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 CCDC149Q6ZUS6 474 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 WDR49Q8IV35 697 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 LRRC52Q8N7C0 313 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 XXYLT1Q8NBI6 393 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 CACTINQ8WUQ7 758 aaKnown RBP13.81□□□□□ -0.2
VPREB3-201ENST00000248948 PCIF1Q9H4Z3 704 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 DSEQ9UL01 958 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 MAFFQ9ULX9 164 aa13.81□□□□□ -0.2
VPREB3-201ENST00000248948 WDR27A2RRH5 827 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 PPEF2O14830 753 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
VPREB3-201ENST00000248948 OAZ2O95190 189 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 CYP11A1P05108 521 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 TMEM191BP0C7N4 346 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 WNT7BP56706 349 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 TFAMQ00059 246 aaKnown RBP13.8□□□□□ -0.2
VPREB3-201ENST00000248948 CTXN3Q4LDR2 81 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 TPGS2Q68CL5 300 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 RSPO2Q6UXX9 243 aaPredicted RBP13.8□□□□□ -0.2
VPREB3-201ENST00000248948 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 TDRD5Q8NAT2 981 aaKnown RBP13.8□□□□□ -0.2
VPREB3-201ENST00000248948 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 SMG7Q92540 1137 aaKnown RBP13.8□□□□□ -0.2
VPREB3-201ENST00000248948 ZNF707Q96C28 371 aaPredicted RBP13.8□□□□□ -0.2
VPREB3-201ENST00000248948 PRKD2Q9BZL6 878 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 CHMP5Q9NZZ3 219 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 CLUHO75153 1309 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
VPREB3-201ENST00000248948 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 OR6C75A6NL08 312 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 PDXKO00764 312 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 SPTLC1O15269 473 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 RFPL2O75678 378 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 ABLIM3O94929 683 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 ITGB3P05106 788 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 ALADP13716 330 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 PSMD6Q15008 389 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 UVSSAQ2YD98 709 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 PPM1LQ5SGD2 360 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 USP37Q86T82 979 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 SLC9A9Q8IVB4 645 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 TMEM130Q8N3G9 435 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 C1orf127Q8N9H9 656 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 SLC7A14Q8TBB6 771 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 NOC3LQ8WTT2 800 aaKnown RBP13.79□□□□□ -0.2
VPREB3-201ENST00000248948 ANKRD36BP1Q96IX9 119 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 RPGRIP1Q96KN7 1286 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 SENP8Q96LD8 212 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 TIGD1Q96MW7 591 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 MTMR12Q9C0I1 747 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 KCTD10Q9H3F6 313 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 PDE11AQ9HCR9 933 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 WDR6Q9NNW5 1121 aaKnown RBP13.79□□□□□ -0.2
VPREB3-201ENST00000248948 INTS13Q9NVM9 706 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 RMND1Q9NWS8 449 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 HOOK1Q9UJC3 728 aaKnown RBP13.79□□□□□ -0.2
VPREB3-201ENST00000248948 PTPRDP23468 1912 aa13.79□□□□□ -0.2
VPREB3-201ENST00000248948 DOCK6Q96HP0 2047 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 DCXO43602 365 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 XYLBO75191 536 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 TNNC2P02585 160 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 SPATA31D3P0C874 917 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 CPB1P15086 417 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 ATF2P15336 505 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 POLR2BP30876 1174 aaKnown RBP13.78□□□□□ -0.2
VPREB3-201ENST00000248948 CYP2J2P51589 502 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 CYP24A1Q07973 514 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 SNW1Q13573 536 aaKnown RBP13.78□□□□□ -0.2
VPREB3-201ENST00000248948 MYBPC2Q14324 1141 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 OVOS1Q6IE37 1185 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 SPATA31D4Q6ZUB0 917 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 OTOP3Q7RTS5 596 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 ELOA2Q8IYF1 753 aaPredicted RBP13.78□□□□□ -0.2
VPREB3-201ENST00000248948 ZDHHC14Q8IZN3 488 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
VPREB3-201ENST00000248948 CXorf38Q8TB03 319 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 SPATA18Q8TC71 538 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 CGRRF1Q99675 332 aa13.78□□□□□ -0.2
VPREB3-201ENST00000248948 C1QTNF1Q9BXJ1 281 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms