RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 SMYD5Q6GMV2 418 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 PLEKHA7Q6IQ23 1121 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 PLPPR4Q7Z2D5 763 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 EXOC8Q8IYI6 725 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 MAIP1Q8WWC4 291 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 ACO2Q99798 780 aaKnown RBP23.32■■□□□ 1.32
RNF39-201ENST00000244360 AGTPBP1Q9UPW5 1226 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 DNAJC25-GNG10A0A024R161 153 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 SPDYE5A6NIY4 337 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 MCL1Q07820 350 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 LAMTOR4Q0VGL1 99 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 LLGL2Q6P1M3 1020 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 EEPD1Q7L9B9 569 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 CACNA2D3Q8IZS8 1091 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 ART4Q93070 314 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 ADAM22Q9P0K1 906 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 ECEL1O95672 775 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 POTEJP0CG39 1038 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 TNFSF9P41273 254 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 MAMLD1Q13495 774 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 SWT1Q5T5J6 900 aaKnown RBP23.31■■□□□ 1.32
RNF39-201ENST00000244360 C11orf70Q9BRQ4 267 aa23.31■■□□□ 1.32
RNF39-201ENST00000244360 MRPL47Q9HD33 250 aaKnown RBP23.31■■□□□ 1.32
RNF39-201ENST00000244360 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.31■■□□□ 1.32
RNF39-201ENST00000244360 OGTO15294 1046 aa23.3■■□□□ 1.32
RNF39-201ENST00000244360 PSTPIP1O43586 416 aa23.3■■□□□ 1.32
RNF39-201ENST00000244360 HARSP12081 509 aaKnown RBP23.3■■□□□ 1.32
RNF39-201ENST00000244360 HSDL1Q3SXM5 330 aa23.3■■□□□ 1.32
RNF39-201ENST00000244360 SGO2Q562F6 1265 aa23.3■■□□□ 1.32
RNF39-201ENST00000244360 GKAP1Q5VSY0 366 aaPredicted RBP23.3■■□□□ 1.32
RNF39-201ENST00000244360 CLMNQ96JQ2 1002 aa23.3■■□□□ 1.32
RNF39-201ENST00000244360 IMPG2Q9BZV3 1241 aa23.3■■□□□ 1.32
RNF39-201ENST00000244360 TXNRD2Q9NNW7 524 aa23.3■■□□□ 1.32
RNF39-201ENST00000244360 SCINQ9Y6U3 715 aa23.3■■□□□ 1.32
RNF39-201ENST00000244360 GOLGA6L7A0A1B0GV03 622 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 PRKCBP05771 671 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 ADCY2Q08462 1091 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 C2CD6Q53TS8 623 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 SCARA3Q6AZY7 606 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 PASD1Q8IV76 773 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 ZBTB8OSQ8IWT0 167 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 SEC16BQ96JE7 1060 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 TMEM109Q9BVC6 243 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 STMN4Q9H169 189 aaPredicted RBP23.29■■□□□ 1.32
RNF39-201ENST00000244360 C2orf40Q9H1Z8 148 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 RBPJLQ9UBG7 517 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 CPSF3Q9UKF6 684 aaKnown RBP23.29■■□□□ 1.32
RNF39-201ENST00000244360 THAP12O43422 761 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 PGK2P07205 417 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 MAN1A1P33908 653 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 KCNJ1P48048 391 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 MOGSQ13724 837 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 SLMAPQ14BN4 828 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 ERMARDQ5T6L9 678 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 TAX1BP1Q86VP1 789 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 TRIM50Q86XT4 487 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 ANKRD13AQ8IZ07 590 aa23.29■■□□□ 1.32
RNF39-201ENST00000244360 RNF25Q96BH1 459 aaPredicted RBP23.29■■□□□ 1.32
RNF39-201ENST00000244360 PROZP22891 400 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 MARK3P27448 753 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 SURF1Q15526 300 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 MAPK6Q16659 721 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 C6orf118Q5T5N4 469 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 CCDC62Q6P9F0 684 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 SYDE1Q6ZW31 735 aaPredicted RBP23.28■■□□□ 1.32
RNF39-201ENST00000244360 PHLDB2Q86SQ0 1253 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 ZBTB33Q86T24 672 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 RNF149Q8NC42 400 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 XPO6Q96QU8 1125 aaKnown RBP23.28■■□□□ 1.32
RNF39-201ENST00000244360 HERPUD2Q9BSE4 406 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 LRRC4CQ9HCJ2 640 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 PTPN22Q9Y2R2 807 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 DCDC2CA8MYV0 355 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 CAND2O75155 1236 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 CST3P01034 146 aaPredicted RBP23.28■■□□□ 1.32
RNF39-201ENST00000244360 PPIL2Q13356 520 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 CHMP6Q96FZ7 201 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 MTMR12Q9C0I1 747 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 WHRNQ9P202 907 aa23.28■■□□□ 1.32
RNF39-201ENST00000244360 NOP56O00567 594 aaKnown RBP23.27■■□□□ 1.32
RNF39-201ENST00000244360 AGTP01019 485 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 SRGAP2CP0DJJ0 459 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 KLF1Q13351 362 aaPredicted RBP23.27■■□□□ 1.32
RNF39-201ENST00000244360 CPLX4Q7Z7G2 160 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 RHOT1Q8IXI2 618 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 CCDC13Q8IYE1 715 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 KATNAL2Q8IYT4 538 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 LRRC71Q8N4P6 559 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.27■■□□□ 1.32
RNF39-201ENST00000244360 C1orf54Q8WWF1 131 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 ZNF606Q8WXB4 792 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 JPH2Q9BR39 696 aaPredicted RBP23.27■■□□□ 1.32
RNF39-201ENST00000244360 TCHPQ9BT92 498 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 NIF3L1Q9GZT8 377 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 PTPRHQ9HD43 1115 aa23.27■■□□□ 1.32
RNF39-201ENST00000244360 LSM8O95777 96 aaKnown RBP23.27■■□□□ 1.31
RNF39-201ENST00000244360 SHBGP04278 402 aa23.27■■□□□ 1.31
RNF39-201ENST00000244360 MMP8P22894 467 aa23.27■■□□□ 1.31
RNF39-201ENST00000244360 MMP13P45452 471 aa23.27■■□□□ 1.31
RNF39-201ENST00000244360 SLC26A2P50443 739 aa23.27■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms