RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TDRD10Q5VZ19 366 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 C9orf57Q5W0N0 161 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 TRIM65Q6PJ69 517 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 IPO4Q8TEX9 1081 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 NT5C1AQ9BXI3 368 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 DAAM1Q9Y4D1 1078 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 TIMM13Q9Y5L4 95 aaPredicted RBP11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 KCNE1P15382 129 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 LHX1P48742 406 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 ZBED6P86452 979 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 IFRD2Q12894 506 aaPredicted RBP11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 CUL2Q13617 745 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 OVOS1Q6IE37 1185 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 HERC6Q8IVU3 1022 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 PHOSPHO2Q8TCD6 241 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 BZW2Q9Y6E2 419 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 UCHL3P15374 230 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 CLCNKBP51801 687 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 MARSP56192 900 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 DEFB103AP81534 67 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 DSC3Q14574 896 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 NR1I3Q14994 352 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 SPOPLQ6IQ16 392 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 SCN4BQ8IWT1 228 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 RIN2Q8WYP3 895 aaPredicted RBP11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 TOP1MTQ969P6 601 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 CYP3A43Q9HB55 503 aa11.9□□□□□ -0.5
TNFAIP3-201ENST00000237289 EDN1P05305 212 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 PON1P27169 355 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 GATMP50440 423 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 SPATA2LQ8IUW3 424 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 ERGIC2Q96RQ1 377 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 CCP110O43303 1012 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 ENPEPQ07075 957 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 USP41Q3LFD5 358 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 H0YGN5 161 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 SSR1P43307 286 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 KCNT2Q6UVM3 1135 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 CRELD2Q6UXH1 353 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 CYP26C1Q6V0L0 522 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 C1orf127Q8N9H9 656 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 FAM84AQ96KN4 292 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 STK33Q9BYT3 514 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 MIS12Q9H081 205 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 MRPL17Q9NRX2 175 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 ADAM28Q9UKQ2 775 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 POLIQ9UNA4 740 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 I3L4J1 428 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 MAPRE1Q15691 268 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 SGO2Q562F6 1265 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 KLHDC7AQ5VTJ3 777 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 PDXDC1Q6P996 788 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 TMCO2Q7Z6W1 182 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 CMTR2Q8IYT2 770 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 STK39Q9UEW8 545 aa11.89□□□□□ -0.51
TNFAIP3-201ENST00000237289 MEIS3P2A8K0S8 358 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 BRCC3P46736 316 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 TMEM86AQ8N2M4 240 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 ELMOD1Q8N336 334 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 TTC16Q8NEE8 873 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 TMEM175Q9BSA9 504 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 EDEM3Q9BZQ6 932 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 NACA2Q9H009 215 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 CERS4Q9HA82 394 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 LCTP09848 1927 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 TMCO5BA8MYB1 307 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 GJB5O95377 273 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 C4BPAP04003 597 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 GNA15P30679 374 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 ARHGAP29Q52LW3 1261 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 LIN9Q5TKA1 542 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 C4orf50Q6ZRC1 276 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 TATDN2Q93075 761 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 EMILIN2Q9BXX0 1053 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 HAPLN2Q9GZV7 340 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 LRRC4Q9HBW1 653 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 DDX43Q9NXZ2 648 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 LRRC10BA6NIK2 292 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 NRP1O14786 923 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 ABL1P00519 1130 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 ADORA2BP29275 332 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 NOP2P46087 812 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 IRF2BP1Q8IU81 584 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 TMTC1Q8IUR5 882 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 RBBP8NLQ8NC74 664 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 FHOD1Q9Y613 1164 aa11.88□□□□□ -0.51
TNFAIP3-201ENST00000237289 PRRG1O14668 218 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 PTPROQ16827 1216 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 ARNTL2Q8WYA1 636 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 HERVK_113Q902F9 699 aa11.87□□□□□ -0.51
TNFAIP3-201ENST00000237289 SCN10AQ9Y5Y9 1956 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms