RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ANKRD36BP1Q96IX9 119 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 TTPALQ9BTX7 342 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 IKZF4Q9H2S9 585 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 KCTD10Q9H3F6 313 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 LMBRD1Q9NUN5 540 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 WDR70Q9NW82 654 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 USP34Q70CQ2 3546 aa12.2□□□□□ -0.46
SF3B6-201ENST00000233468 BICDL2A1A5D9 508 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 C2orf71A6NGG8 1288 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 SYN3O14994 580 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 C1RP00736 705 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 TNNC2P02585 160 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 NR3C1P04150 777 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 ADH1AP07327 375 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 TMEM191BP0C7N4 346 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 PTMSP20962 102 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 MCM4P33991 863 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 MRE11P49959 708 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 TFAMQ00059 246 aaKnown RBP12.19□□□□□ -0.46
SF3B6-201ENST00000233468 DSG1Q02413 1049 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 SPAG1Q07617 926 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 DUOXA2Q1HG44 320 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 EDRF1Q3B7T1 1238 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 FAM171A1Q5VUB5 890 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 CBWD2Q8IUF1 395 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 WDR49Q8IV35 697 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 RDH13Q8NBN7 331 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 VN1R2Q8NFZ6 395 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 BCL7CQ8WUZ0 217 aaPredicted RBP12.19□□□□□ -0.46
SF3B6-201ENST00000233468 C18orf25Q96B23 403 aaPredicted RBP12.19□□□□□ -0.46
SF3B6-201ENST00000233468 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
SF3B6-201ENST00000233468 ZNF560Q96MR9 790 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 PHOX2BQ99453 314 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 OXCT2Q9BYC2 517 aaPredicted RBP12.19□□□□□ -0.46
SF3B6-201ENST00000233468 NUP62CLQ9H1M0 184 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 CXCL16Q9H2A7 254 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 CLSTN2Q9H4D0 955 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 GOLGA2P5Q9HBQ8 144 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 CHST7Q9NS84 486 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 DPP3Q9NY33 737 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 TUBGCP4Q9UGJ1 667 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 MAN1B1Q9UKM7 699 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 MAPK8IP1Q9UQF2 711 aa12.19□□□□□ -0.46
SF3B6-201ENST00000233468 H7C4K7 107 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 CETN3O15182 167 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 MAPK13O15264 365 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 NFICP08651 508 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 KRT13P13646 458 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 TNNI1P19237 187 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 NR2F2P24468 414 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
SF3B6-201ENST00000233468 PRCPP42785 496 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 RBP5P82980 135 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 LRRC63Q05C16 580 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 SOX4Q06945 474 aaPredicted RBP12.18□□□□□ -0.46
SF3B6-201ENST00000233468 ENPEPQ07075 957 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 CYP24A1Q07973 514 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 ADAM9Q13443 819 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 PSMD6Q15008 389 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 CAMK4Q16566 473 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 DUSP6Q16828 381 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 CEP135Q66GS9 1140 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 ANKS3Q6ZW76 656 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 CEP57Q86XR8 500 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 RNF168Q8IYW5 571 aaPredicted RBP12.18□□□□□ -0.46
SF3B6-201ENST00000233468 EFHBQ8N7U6 833 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 SMRP1Q8NCR6 262 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 HASPINQ8TF76 798 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 RIN2Q8WYP3 895 aaPredicted RBP12.18□□□□□ -0.46
SF3B6-201ENST00000233468 CASP10Q92851 521 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 PAAF1Q9BRP4 392 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 GPR62Q9BZJ7 368 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 FNIP2Q9P278 1114 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 ITGA11Q9UKX5 1188 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 USP15Q9Y4E8 981 aaPredicted RBP12.18□□□□□ -0.46
SF3B6-201ENST00000233468 KMT2EQ8IZD2 1858 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 ZDBF2Q9HCK1 2354 aa12.18□□□□□ -0.46
SF3B6-201ENST00000233468 HIDE1A8MVS5 230 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 C2CD2LO14523 706 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 MEFVO15553 781 aaPredicted RBP12.17□□□□□ -0.46
SF3B6-201ENST00000233468 EFEMP2O95967 443 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
SF3B6-201ENST00000233468 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
SF3B6-201ENST00000233468 FGFR3P22607 806 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 KLRC2P26717 231 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 TAF6P49848 677 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 FKBP3Q00688 224 aaKnown RBP12.17□□□□□ -0.46
SF3B6-201ENST00000233468 PLCB2Q00722 1185 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 MYO1EQ12965 1108 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 MORC3Q14149 939 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 SV2CQ496J9 727 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 KIAA0319Q5VV43 1072 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 C9orf57Q5W0N0 161 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 FOXR2Q6PJQ5 311 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 DSTYKQ6XUX3 929 aa12.17□□□□□ -0.46
SF3B6-201ENST00000233468 INTS8Q75QN2 995 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms