RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 RASSF8Q8NHQ8 419 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 LINC01599Q8WXQ3 324 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 P2RX5Q93086 422 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 CHAMP1Q96JM3 812 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 IFT74Q96LB3 600 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 ZNF558Q96NG5 402 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 CNTNAP3BQ96NU0 1288 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 FDXACB1Q9BRP7 624 aaPredicted RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 POLR3CQ9BUI4 534 aaPredicted RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 CNTNAP3Q9BZ76 1288 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 TRIM6Q9C030 488 aaPredicted RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 POLR3FQ9H1D9 316 aaPredicted RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 C2orf40Q9H1Z8 148 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 DHX33Q9H6R0 707 aaKnown RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 PRDM16Q9HAZ2 1276 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 TYW1Q9NV66 732 aaKnown RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 RGL1Q9NZL6 768 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 LRWD1Q9UFC0 647 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 PHLPP2Q6ZVD8 1323 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 DOCK5Q9H7D0 1870 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 CNTNAP2Q9UHC6 1331 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 IGKV6-21A0A0C4DH24 114 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 EPOPA6NHQ4 379 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 C9IYK1 514 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 C5orf67F2Z3F1 127 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 EDIL3O43854 480 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 ARHGEF15O94989 841 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 EOMESO95936 686 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 SRGAP2CP0DJJ0 459 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 TECP42680 631 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 GRIA4P48058 902 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 NPEPPSP55786 919 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 KRT17Q04695 432 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 ST3GAL1Q11201 340 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 PKP1Q13835 747 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 SPRED3Q2MJR0 410 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 NOTUMQ6P988 496 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 BRAPQ7Z569 592 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 ECHDC2Q86YB7 292 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 RNF149Q8NC42 400 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 DEPTORQ8TB45 409 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 TMEM40Q8WWA1 233 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 PMEPA1Q969W9 287 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 TMEM143Q96AN5 459 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 ZNF689Q96CS4 500 aaPredicted RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 ZNF668Q96K58 619 aaPredicted RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 FAM193BQ96PV7 902 aaPredicted RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 TMX1Q9H3N1 280 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 DZANK1Q9NVP4 752 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 STK39Q9UEW8 545 aa6.25□□□□□ -1.41
AFP-201ENST00000226359 DBR1Q9UK59 544 aaKnown RBP6.25□□□□□ -1.41
AFP-201ENST00000226359 VPS37CA5D8V6 355 aaPredicted RBP6.24□□□□□ -1.41
AFP-201ENST00000226359 TMEM150BA6NC51 233 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 LRRIQ4A6NIV6 560 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 INO80B-WBP1J3KQ70 363 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 MGEA5O60502 916 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 SLITRK3O94933 977 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 CSPG5O95196 566 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 U2AF2P26368 475 aaKnown RBP eCLIP6.24□□□□□ -1.414e-16■■■□□ 17
AFP-201ENST00000226359 CA8P35219 290 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 PRPHP41219 470 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 PPP2R5EQ16537 467 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 FAM102BQ5T8I3 360 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 ZNF468Q5VIY5 522 aaPredicted RBP6.24□□□□□ -1.41
AFP-201ENST00000226359 CLEC17AQ6ZS10 378 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 GK5Q6ZS86 529 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 HFE2Q6ZVN8 426 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 PRPF31Q8WWY3 499 aaKnown RBP6.24□□□□□ -1.41
AFP-201ENST00000226359 ASB2Q96Q27 587 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 MTMR9Q96QG7 549 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 SH2D3AQ9BRG2 576 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 NT5C3AQ9H0P0 336 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 TMEM60Q9H2L4 133 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 UBE2ZQ9H832 354 aaPredicted RBP6.24□□□□□ -1.41
AFP-201ENST00000226359 UBN1Q9NPG3 1134 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 ENTPD7Q9NQZ7 604 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 KAT6AQ92794 2004 aa6.24□□□□□ -1.41
AFP-201ENST00000226359 A0A0U1RQF3 1178 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 SLC26A4O43511 780 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 STBD1O95210 358 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 FGFR1P11362 822 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 FGFR4P22455 802 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 RPA1P27694 616 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 RARRES1P49788 294 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 FAM189BP81408 668 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 CLCQ05315 142 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 POU5F1BQ06416 359 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 SPIRE1Q08AE8 756 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ZNF385CQ66K41 422 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 CCNJLQ8IV13 435 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 COLGALT1Q8NBJ5 622 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 PIGOQ8TEQ8 1089 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 THAP3Q8WTV1 239 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 KIFAP3Q92845 792 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 CALML4Q96GE6 196 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 TMEM169Q96HH4 297 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 NECAB3Q96P71 396 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 HHIPQ96QV1 700 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 RPS6KC1Q96S38 1066 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 UHRF1Q96T88 793 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms