RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 PPEF2O14830 753 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 ASS1P00966 412 aaKnown RBP14.15□□□□□ -0.14
TIMP1-201ENST00000218388 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 ODC1P11926 461 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 ERVK-21P61565 698 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 NOP14P78316 857 aaKnown RBP14.15□□□□□ -0.14
TIMP1-201ENST00000218388 PLCB2Q00722 1185 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 PLCB3Q01970 1234 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
TIMP1-201ENST00000218388 WDR72Q3MJ13 1102 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 FUT10Q6P4F1 479 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 APTXQ7Z2E3 356 aaKnown RBP14.15□□□□□ -0.14
TIMP1-201ENST00000218388 EHBP1Q8NDI1 1231 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 HASPINQ8TF76 798 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 RABGGTAQ92696 567 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 FAXDC2Q96IV6 333 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 SUSD3Q96L08 255 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 FAM81BQ96LP2 452 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 NT5C1BQ96P26 610 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
TIMP1-201ENST00000218388 PUF60Q9UHX1 559 aaKnown RBP14.15□□□□□ -0.14
TIMP1-201ENST00000218388 DSEQ9UL01 958 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 TMEM265A0A087WTH1 108 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 HUS1O60921 280 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 FGF18O76093 207 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 AARSP49588 968 aaKnown RBP eCLIP14.14□□□□□ -0.15
TIMP1-201ENST00000218388 UBE3AQ05086 875 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 DPH6Q7L8W6 267 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 DDX53Q86TM3 631 aaKnown RBP14.14□□□□□ -0.15
TIMP1-201ENST00000218388 KLHL23Q8NBE8 558 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 C3orf58Q8NDZ4 430 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 APPL2Q8NEU8 664 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 FBXO22Q8NEZ5 403 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 SEMA4DQ92854 862 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 SENP8Q96LD8 212 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 PCMTD1Q96MG8 357 aaPredicted RBP14.14□□□□□ -0.15
TIMP1-201ENST00000218388 C17orf80Q9BSJ5 609 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 NIF3L1Q9GZT8 377 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 INTS2Q9H0H0 1204 aaKnown RBP14.14□□□□□ -0.15
TIMP1-201ENST00000218388 XYLT2Q9H1B5 865 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 GDAP2Q9NXN4 497 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 IFNKQ9P0W0 207 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 NXF1Q9UBU9 619 aaKnown RBP14.14□□□□□ -0.15
TIMP1-201ENST00000218388 MTUS1Q9ULD2 1270 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 LZTS1Q9Y250 596 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 SNX9Q9Y5X1 595 aa14.14□□□□□ -0.15
TIMP1-201ENST00000218388 GOLGA6L3A6NEY3 463 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 M0QZQ0 153 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 CYB561D2O14569 222 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 SYN3O14994 580 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 SOD2P04179 222 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 ITGB1P05556 798 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 RFX1P22670 979 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 TBXAS1P24557 533 aaPredicted RBP14.13□□□□□ -0.15
TIMP1-201ENST00000218388 BRCC3P46736 316 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 YWHAEP62258 255 aaKnown RBP14.13□□□□□ -0.15
TIMP1-201ENST00000218388 USP41Q3LFD5 358 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 TIGD5Q53EQ6 642 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 FAM171A1Q5VUB5 890 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 PDXDC1Q6P996 788 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 TRIM65Q6PJ69 517 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 SARM1Q6SZW1 724 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.13□□□□□ -0.15
TIMP1-201ENST00000218388 TMEM173Q86WV6 379 aaPredicted RBP14.13□□□□□ -0.15
TIMP1-201ENST00000218388 METTL23Q86XA0 190 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 TMEM86AQ8N2M4 240 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 TMEM130Q8N3G9 435 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 TOP6BLQ8N6T0 577 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 SPATA18Q8TC71 538 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 ERGIC2Q96RQ1 377 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 MMS19Q96T76 1030 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 PI4K2AQ9BTU6 479 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 HERC2P3Q9BVR0 1158 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 PCDHB8Q9UN66 801 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 SSX2IPQ9Y2D8 614 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 DAAM1Q9Y4D1 1078 aa14.13□□□□□ -0.15
TIMP1-201ENST00000218388 A0A1W2PQC6 194 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 F8W810 466 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 SPTLC1O15269 473 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 ARHGEF15O94989 841 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 FAM163BP0C2L3 166 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 TYMPP19971 482 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 PON1P27169 355 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 LRMPQ12912 555 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 NR1I3Q14994 352 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 SYCP1Q15431 976 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 KIAA1841Q6NSI8 718 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 CD300LGQ6UXG3 332 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 PPM1KQ8N3J5 372 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 TTC39CQ8N584 583 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 LMO3Q8TAP4 145 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 BCL7CQ8WUZ0 217 aaPredicted RBP14.12□□□□□ -0.15
TIMP1-201ENST00000218388 ARNTL2Q8WYA1 636 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 NAP1L5Q96NT1 182 aaPredicted RBP14.12□□□□□ -0.15
TIMP1-201ENST00000218388 LSM14BQ9BX40 385 aaKnown RBP14.12□□□□□ -0.15
TIMP1-201ENST00000218388 GPR62Q9BZJ7 368 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 TRIM5Q9C035 493 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 DNAI2Q9GZS0 605 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 FAM124BQ9H5Z6 455 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms