RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 CCDC62Q6P9F0 684 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 DSTYKQ6XUX3 929 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 XXYLT1Q8NBI6 393 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 ZNF75CPQ92670 426 aaPredicted RBP10.24□□□□□ -0.77
TUBB1-201ENST00000217133 SGIP1Q9BQI5 828 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
TUBB1-201ENST00000217133 SAR1AQ9NR31 198 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 LARSQ9P2J5 1176 aaKnown RBP10.24□□□□□ -0.77
TUBB1-201ENST00000217133 ZNF148Q9UQR1 794 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 NEU2Q9Y3R4 380 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 GAKO14976 1311 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 MAP3K13O43283 966 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 RTN3O95197 1032 aaPredicted RBP10.24□□□□□ -0.77
TUBB1-201ENST00000217133 CFBP00751 764 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 CACNA2D1P54289 1103 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 TBC1D10BQ4KMP7 808 aaPredicted RBP10.24□□□□□ -0.77
TUBB1-201ENST00000217133 EPC2Q52LR7 807 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 RASIP1Q5U651 963 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 ACAD10Q6JQN1 1059 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 CLNKQ7Z7G1 428 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 KCTD17Q8N5Z5 321 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 SH3TC2Q8TF17 1288 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 TTC25Q96NG3 672 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 ANKFY1Q9P2R3 1169 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 C2CD2LO14523 706 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 ABHD2P08910 425 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 GSTA2P09210 222 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 ATP2B4P23634 1241 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 SERPINB4P48594 390 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 CUL3Q13618 768 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 KPNB1Q14974 876 aaKnown RBP10.24□□□□□ -0.77
TUBB1-201ENST00000217133 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 SAMD1Q6SPF0 538 aaPredicted RBP10.24□□□□□ -0.77
TUBB1-201ENST00000217133 LRRC74BQ6ZQY2 392 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 SLC9A9Q8IVB4 645 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 DCAF4Q8WV16 495 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 CCDC17Q96LX7 622 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 KREMEN1Q96MU8 473 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 NT5C1BQ96P26 610 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 HERPUD2Q9BSE4 406 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 CADM1Q9BY67 442 aaKnown RBP10.24□□□□□ -0.77
TUBB1-201ENST00000217133 TRIM55Q9BYV6 548 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 TMEM206Q9H813 350 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 IRAK4Q9NWZ3 460 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 WDR35Q9P2L0 1181 aa10.24□□□□□ -0.77
TUBB1-201ENST00000217133 LAMB2P55268 1798 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 PRPF4O43172 522 aaKnown RBP eCLIP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ESRRAP11474 423 aaPredicted RBP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 PRELPP51888 382 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 SLC34A1Q06495 639 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 LAMB3Q13751 1172 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 NBPF20Q3BBV1 942 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 KAZNQ674X7 775 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ZBED8Q8IZ13 594 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 CRYGNQ8WXF5 182 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ACCSQ96QU6 501 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 FIZ1Q96SL8 496 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 BTBD10Q9BSF8 475 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 TUBB6Q9BUF5 446 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 OSBPL8Q9BZF1 889 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 FOXP3Q9BZS1 431 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 TMEM117Q9H0C3 514 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ALG13Q9NP73 1137 aaKnown RBP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 HSPBP1Q9NZL4 362 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 PIM2Q9P1W9 311 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 HEY2Q9UBP5 337 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ASB3Q9Y575 518 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 KIF13BQ9NQT8 1826 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 DDX39AO00148 427 aaKnown RBP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 KRT4P19013 534 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 MUTP22033 750 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 CIITAP33076 1130 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 PIK3CAP42336 1068 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 SCNN1DP51172 638 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 PLCB3Q01970 1234 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 CCNG2Q16589 344 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 C2CD6Q53TS8 623 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 DDX60LQ5H9U9 1706 aaKnown RBP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 DAB2IPQ5VWQ8 1189 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 STYK1Q6J9G0 422 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 RFX8Q6ZV50 586 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 OTOP1Q7RTM1 612 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ZCCHC9Q8N567 271 aaKnown RBP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 DENND1AQ8TEH3 1009 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ZCWPW1Q9H0M4 648 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 SPON1Q9HCB6 807 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 A0A1W2PPM1 405 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 MAGEA13PA6NCF6 341 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 TRAFD1O14545 582 aaPredicted RBP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 IFNB1P01574 187 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 UBTFL6P0CB48 400 aaPredicted RBP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 CD58P19256 250 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ARFIP2P53365 341 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 RGS9BPQ6ZS82 235 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ZFAND2BQ8WV99 257 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 SHC3Q92529 594 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 DHX38Q92620 1227 aaKnown RBP10.23□□□□□ -0.77
TUBB1-201ENST00000217133 ELMO3Q96BJ8 720 aa10.23□□□□□ -0.77
TUBB1-201ENST00000217133 NSL1Q96IY1 281 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms