RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 SIX1Q15475 284 aaPredicted RBP8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 ZSCAN26Q16670 478 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 LIN9Q5TKA1 542 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 MAMDC4Q6UXC1 1216 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 LEKR1Q6ZMV7 388 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 CCDC105Q8IYK2 499 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 UBR7Q8N806 425 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 MS4A4AQ96JQ5 239 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 RASAL2Q9UJF2 1139 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 MTUS1Q9ULD2 1270 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 AKT3Q9Y243 479 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 A0A087WZ62 844 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 IQCA1LA6NCM1 817 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 FAM187AA6NFU0 413 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 GH1P01241 217 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 VTNP04004 478 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 KRT19P08727 400 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 PLTPP55058 493 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 MAMLD1Q13495 774 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 LAMC2Q13753 1193 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 SGSM1Q2NKQ1 1148 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 FDXACB1Q9BRP7 624 aaPredicted RBP8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 CENPHQ9H3R5 247 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 NXF1Q9UBU9 619 aaKnown RBP8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 PCYOX1Q9UHG3 505 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 ATP8A1Q9Y2Q0 1164 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 IVNS1ABPQ9Y6Y0 642 aa8.5□□□□□ -1.05
HMGXB4-201ENST00000216106 LOC102724159A0A0B4J2E5 919 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 GJC1P36383 396 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 PTP4A2Q12974 167 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 PWP2Q15269 919 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 SURF1Q15526 300 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 TTC19Q6DKK2 380 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 C1orf131Q8NDD1 294 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 C1orf54Q8WWF1 131 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 BRI3BPQ8WY22 251 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 ANKRD36BP1Q96IX9 119 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 CPB2Q96IY4 423 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 HERPUD2Q9BSE4 406 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 XYLT2Q9H1B5 865 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 USTQ9Y2C2 406 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 GPR25O00155 361 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 PROSCO94903 275 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 TNNC2P02585 160 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 NFICP08651 508 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 CETPP11597 493 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 COILP38432 576 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 ASPAP45381 313 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 PHKA2P46019 1235 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 RAP1GAPP47736 663 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 HNRNPH2P55795 449 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 PHF13Q86YI8 300 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 CD302Q8IX05 232 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 FBXO25Q8TCJ0 367 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 RPF1Q9H9Y2 349 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 ZDHHC18Q9NUE0 388 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 POLIQ9UNA4 740 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 KAT6AQ92794 2004 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 H0YGN5 161 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 TLR3O15455 904 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 B4GALT4O60513 344 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 SLC1A1P43005 524 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 SSR1P43307 286 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 RPL21P46778 160 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 ATP1A2P50993 1020 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 RPL7AP62424 266 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 C1QBPQ07021 282 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 SNX1Q13596 522 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 GPR162Q16538 588 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 CYP1B1Q16678 543 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 SGO2Q562F6 1265 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 ZNF484Q5JVG2 852 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 PNMA8AQ86V59 439 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 CCDC50Q8IVM0 306 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 PPTC7Q8NI37 304 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 GTF3C2Q8WUA4 911 aaPredicted RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 ATG4AQ8WYN0 398 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 MRPL47Q9HD33 250 aaKnown RBP8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 VTA1Q9NP79 307 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 TNFSF13BQ9Y275 285 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 NFS1Q9Y697 457 aa8.49□□□□□ -1.05
HMGXB4-201ENST00000216106 ASAP2O43150 1006 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 MMP8P22894 467 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 TAS2R40P59535 323 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 MTMR3Q13615 1198 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 PLEKHA7Q6IQ23 1121 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 ZDHHC24Q6UX98 284 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 DPP9Q86TI2 863 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 DDX27Q96GQ7 796 aaKnown RBP8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 VCPIP1Q96JH7 1222 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 KATNBL1Q9H079 304 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 PRMT7Q9NVM4 692 aaPredicted RBP8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 GRHL1Q9NZI5 618 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 SCINQ9Y6U3 715 aa8.48□□□□□ -1.05
HMGXB4-201ENST00000216106 GOLGA6L10A6NI86 522 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms