RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ASAP3Q8TDY4 903 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 R3HDMLQ9H3Y0 253 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 PIH1D1Q9NWS0 290 aaKnown RBP15.98■□□□□ 0.15
EFNB1-201ENST00000204961 PCYOX1Q9UHG3 505 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 STK24Q9Y6E0 443 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 E2F8A0AVK6 867 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 EDN1P05305 212 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 KRT16P08779 473 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 FOXN2P32314 431 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 TAF5Q15542 800 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 SPDYE2Q495Y8 402 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 PCNX4Q63HM2 1172 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 PSPC1Q8WXF1 523 aaKnown RBP15.98■□□□□ 0.15
EFNB1-201ENST00000204961 JDP2Q8WYK2 163 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 TXLNGYQ9BZA5 131 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 NSRP1Q9H0G5 558 aaKnown RBP15.98■□□□□ 0.15
EFNB1-201ENST00000204961 TBC1D22BQ9NU19 505 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 RREB1Q92766 1687 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 CBX6O95503 412 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 PECAM1P16284 738 aaPredicted RBP15.97■□□□□ 0.15
EFNB1-201ENST00000204961 MAGEA4P43358 317 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 MYL6P60660 151 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 BASP1P80723 227 aaKnown RBP15.97■□□□□ 0.15
EFNB1-201ENST00000204961 MCF2L2Q86YR7 1114 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 DDX1Q92499 740 aaKnown RBP15.97■□□□□ 0.15
EFNB1-201ENST00000204961 ERP27Q96DN0 273 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 HAPLN2Q9GZV7 340 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 MYOZ2Q9NPC6 264 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 NEU2Q9Y3R4 380 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 LAMA3Q16787 3333 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 GRIN3BO60391 1043 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 SNX3O60493 162 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 PTGER2P43116 358 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 SCYL2Q6P3W7 929 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 TAS1R3Q7RTX0 852 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 AGAP11Q8TF27 550 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 RPS6KC1Q96S38 1066 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 JPH1Q9HDC5 661 aaPredicted RBP15.97■□□□□ 0.15
EFNB1-201ENST00000204961 PARP2Q9UGN5 583 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 USP15Q9Y4E8 981 aaPredicted RBP15.97■□□□□ 0.15
EFNB1-201ENST00000204961 NR2E3Q9Y5X4 410 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 UBIAD1Q9Y5Z9 338 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 MRPL42Q9Y6G3 142 aaKnown RBP15.97■□□□□ 0.15
EFNB1-201ENST00000204961 NUDT17P0C025 328 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 RAB6CQ53S08 254 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 LIN9Q5TKA1 542 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 SPATA21Q7Z572 469 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 ATL2Q8NHH9 583 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 CD101Q93033 1021 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 RAB6CQ9H0N0 254 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 GINM1Q9NU53 330 aa15.97■□□□□ 0.15
EFNB1-201ENST00000204961 SUN1O94901 812 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 ATP6V1G2O95670 118 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 CYP1A2P05177 515 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 CD48P09326 243 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 GZMAP12544 262 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 SPATS2Q86XZ4 545 aaKnown RBP15.96■□□□□ 0.15
EFNB1-201ENST00000204961 PGM2Q96G03 612 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 DEFB129Q9H1M3 183 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 CYP26B1Q9NR63 512 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 A0A0G2JND7 137 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 INO80B-WBP1J3KQ70 363 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 TP73O15350 636 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 CPA2P48052 419 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 NCOA4Q13772 614 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 NBPF20Q3BBV1 942 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 BSPRYQ5W0U4 402 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 CTAGE3PQ8IX95 158 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 NSMCE1Q8WV22 266 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 SEC14L1Q92503 715 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 TRIM56Q9BRZ2 755 aaKnown RBP15.96■□□□□ 0.15
EFNB1-201ENST00000204961 INO80BQ9C086 356 aaPredicted RBP15.96■□□□□ 0.15
EFNB1-201ENST00000204961 NPHS2Q9NP85 383 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 KLHL14Q9P2G3 628 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 SLC9A2Q9UBY0 812 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 POLIQ9UNA4 740 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 NHSQ6T4R5 1651 aa15.96■□□□□ 0.15
EFNB1-201ENST00000204961 FDX1P10109 184 aa15.96■□□□□ 0.14
EFNB1-201ENST00000204961 RPA3P35244 121 aaPredicted RBP15.96■□□□□ 0.14
EFNB1-201ENST00000204961 HSD17B4P51659 736 aa15.96■□□□□ 0.14
EFNB1-201ENST00000204961 TRAF1Q13077 416 aa15.96■□□□□ 0.14
EFNB1-201ENST00000204961 EMC2Q15006 297 aa15.96■□□□□ 0.14
EFNB1-201ENST00000204961 TMEM63BQ5T3F8 832 aa15.96■□□□□ 0.14
EFNB1-201ENST00000204961 GPAT2Q6NUI2 795 aa15.96■□□□□ 0.14
EFNB1-201ENST00000204961 SLC9A9Q8IVB4 645 aa15.96■□□□□ 0.14
EFNB1-201ENST00000204961 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.14
EFNB1-201ENST00000204961 STRA6Q9BX79 667 aa15.96■□□□□ 0.14
EFNB1-201ENST00000204961 ACTR5Q9H9F9 607 aaPredicted RBP15.96■□□□□ 0.14
EFNB1-201ENST00000204961 MYO18AQ92614 2054 aaKnown RBP15.95■□□□□ 0.14
EFNB1-201ENST00000204961 AVILO75366 819 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 RGS20O76081 388 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 MAMLD1Q13495 774 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 HHATQ5VTY9 493 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 DNAJC24Q6P3W2 148 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 MAP4K3Q8IVH8 894 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 DDX27Q96GQ7 796 aaKnown RBP15.95■□□□□ 0.14
EFNB1-201ENST00000204961 IMPG2Q9BZV3 1241 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 SLC38A10Q9HBR0 1119 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 UVRAGQ9P2Y5 699 aa15.95■□□□□ 0.14
EFNB1-201ENST00000204961 MCM8Q9UJA3 840 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms