RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PLEKHA5Q9HAU0 1116 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ZNF112Q9UJU3 913 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TDRKHQ9Y2W6 561 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 C21orf2O43822 256 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TBC1D4O60343 1298 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RBP3P10745 1247 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GNSP15586 552 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GTF2A2P52657 109 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ELAVL2Q12926 359 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 BIKQ13323 160 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FAM26FQ5R3K3 315 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CCDC149Q6ZUS6 474 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 DIS3L2Q8IYB7 885 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 TRIM63Q969Q1 353 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 MAGOHBQ96A72 148 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 AVENQ9NQS1 362 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 PDE2AO00408 941 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 CALB1P05937 261 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TAP1Q03518 808 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KRT24Q2M2I5 525 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 LRRC69Q6ZNQ3 347 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SYNE4Q8N205 404 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CCDC24Q8N4L8 307 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 EFCAB3Q8N7B9 438 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 STAMBPL1Q96FJ0 436 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 OTUD5Q96G74 571 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RBBP8Q99708 897 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 DNAJC5Q9H3Z4 198 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ACAD9Q9H845 621 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TRIM13O60858 407 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 IFNA14P01570 189 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CYP2B6P20813 491 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RPL10AP62906 217 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 CBX3Q13185 183 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TCEAL6Q6IPX3 200 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KCNB2Q92953 911 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FAM162AQ96A26 154 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 PRMT6Q96LA8 375 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 TCEANC2Q96MN5 208 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 DBNDD1Q9H9R9 158 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 NSMCE4AQ9NXX6 385 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 NCDNQ9UBB6 729 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RNF103-CHMP3A0A140T963 221 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SLC25A12O75746 678 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FKBP9O95302 570 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ANXA1P04083 346 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 HOXC6P09630 235 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 PCSK1P29120 753 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 VSNL1P62760 191 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 STX3Q13277 289 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 AAK1Q2M2I8 961 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FASTKD1Q53R41 847 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 C2CD6Q53TS8 623 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SLC9A4Q6AI14 798 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FKBP9P1Q75LS8 142 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ADCK1Q86TW2 530 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 PDIK1LQ8N165 341 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CMTR1Q8N1G2 835 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 TMEM35BQ8NCS4 154 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CDK5RAP1Q96SZ6 601 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 STK39Q9UEW8 545 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FBXO2Q9UK22 296 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 C17orf102A2RUQ5 167 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GCATO75600 419 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RRM1P23921 792 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ADORA2BP29275 332 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CHI3L1P36222 383 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 MTTPP55157 894 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CASP10Q92851 521 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 IRX2Q9BZI1 471 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 PACSIN3Q9UKS6 424 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CDH7Q9ULB5 785 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 MAGEB2O15479 319 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 DEAF1O75398 565 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 ESRRAP11474 423 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 KCNA6P17658 529 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TYW1BQ6NUM6 668 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 OTOAQ7RTW8 1153 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 DGKHQ86XP1 1220 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 C18orf25Q96B23 403 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 PCDHGB5Q9Y5G0 923 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GDF11O95390 407 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 HNRNPCP07910 306 aaKnown RBP eCLIP3.6□□□□□ -1.83
NEB-201ENST00000172853 HMBSP08397 361 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 MTA1Q13330 715 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TKFCQ3LXA3 575 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 PHACTR3Q96KR7 559 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 NOX1Q9Y5S8 564 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 AFF2P51816 1311 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 DDX3XO00571 662 aaKnown RBP eCLIP3.6□□□□□ -1.83
NEB-201ENST00000172853 MTA2O94776 668 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 WARSP23381 471 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 MXI1P50539 228 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GEMIN4P57678 1058 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 DMWDQ09019 674 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ITGA9Q13797 1035 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GNASQ5JWF2 1037 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RASSF6Q6ZTQ3 369 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RNF135Q8IUD6 432 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 PLD3Q8IV08 490 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms