RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 WDR93Q6P2C0 686 aa13.16□□□□□ -0.3
LMCD1-201ENST00000157600 CCNI2Q6ZMN8 369 aaPredicted RBP13.16□□□□□ -0.3
LMCD1-201ENST00000157600 SPATA18Q8TC71 538 aa13.16□□□□□ -0.3
LMCD1-201ENST00000157600 WHRNQ9P202 907 aa13.16□□□□□ -0.3
LMCD1-201ENST00000157600 DEPDC5O75140 1603 aa13.16□□□□□ -0.3
LMCD1-201ENST00000157600 DIP2BQ9P265 1576 aa13.16□□□□□ -0.3
LMCD1-201ENST00000157600 ZMYM2Q9UBW7 1377 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 TOMM70O94826 608 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 HIST1H2AGP0C0S8 130 aaPredicted RBP13.15□□□□□ -0.3
LMCD1-201ENST00000157600 HIST1H2ADP20671 130 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 S100A5P33763 92 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 KRR1Q13601 381 aaKnown RBP13.15□□□□□ -0.3
LMCD1-201ENST00000157600 HIST1H2AHQ96KK5 128 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 HIST1H2AJQ99878 128 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 H2AFJQ9BTM1 129 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 GOLPH3Q9H4A6 298 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 ABT1Q9ULW3 272 aaKnown RBP13.15□□□□□ -0.3
LMCD1-201ENST00000157600 RRN3P2A6NIE6 340 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 GARTP22102 1010 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 KSR1Q8IVT5 923 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 GANCQ8TET4 914 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 PCSK1NQ9UHG2 260 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 FAM170AA1A519 330 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 CFAP99D6REC4 459 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 KITP10721 976 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 RAP1GDS1P52306 607 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 STX3Q13277 289 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 DCAF4L1Q3SXM0 396 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 LRRC8EQ6NSJ5 796 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 LCA5Q86VQ0 697 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 ERAP1Q9NZ08 941 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 GALCP54803 685 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 PDCD6IPQ8WUM4 868 aaKnown RBP13.15□□□□□ -0.3
LMCD1-201ENST00000157600 REEP2Q9BRK0 252 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 ZNF518BQ9C0D4 1074 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 DPYSL4O14531 572 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 NME3Q13232 169 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 E4F1Q66K89 784 aaPredicted RBP13.15□□□□□ -0.3
LMCD1-201ENST00000157600 PPIL6Q8IXY8 311 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 ANKS1AQ92625 1134 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 RIC8BQ9NVN3 520 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 FNDC3AQ9Y2H6 1198 aaKnown RBP13.15□□□□□ -0.3
LMCD1-201ENST00000157600 KANSL1LA0AUZ9 987 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 E7ENQ6 273 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 SIKE1Q9BRV8 207 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 NDUFA13Q9P0J0 144 aa13.15□□□□□ -0.3
LMCD1-201ENST00000157600 CLASP2O75122 1294 aaKnown RBP13.15□□□□□ -0.31
LMCD1-201ENST00000157600 HMOX2P30519 316 aa13.15□□□□□ -0.31
LMCD1-201ENST00000157600 CCZ1BP86790 482 aa13.15□□□□□ -0.31
LMCD1-201ENST00000157600 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.31
LMCD1-201ENST00000157600 LBRQ14739 615 aaKnown RBP13.15□□□□□ -0.31
LMCD1-201ENST00000157600 BOLA3Q53S33 107 aa13.15□□□□□ -0.31
LMCD1-201ENST00000157600 CENPPQ6IPU0 288 aa13.15□□□□□ -0.31
LMCD1-201ENST00000157600 SPATA2LQ8IUW3 424 aaPredicted RBP13.15□□□□□ -0.31
LMCD1-201ENST00000157600 ANKRD7Q92527 254 aa13.15□□□□□ -0.31
LMCD1-201ENST00000157600 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.31
LMCD1-201ENST00000157600 ZNRF3Q9ULT6 936 aa13.15□□□□□ -0.31
LMCD1-201ENST00000157600 ITIH4Q14624 930 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 SRLQ86TD4 932 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 USP38Q8NB14 1042 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 RNF149Q8NC42 400 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 VGLL3A8MV65 326 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 CSF1RP07333 972 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 PSMA3P25788 255 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
LMCD1-201ENST00000157600 NAPEPLDQ6IQ20 393 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 PID1Q7Z2X4 250 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 NIF3L1Q9GZT8 377 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 PLAGL2Q9UPG8 496 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 DFFAO00273 331 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 PDHBP11177 359 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 ADRM1Q16186 407 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 TRIM69Q86WT6 500 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 TDRD3Q9H7E2 651 aaKnown RBP13.14□□□□□ -0.31
LMCD1-201ENST00000157600 ATP5BP06576 529 aaKnown RBP13.14□□□□□ -0.31
LMCD1-201ENST00000157600 ZBED2Q9BTP6 218 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 TUBGCP4Q9UGJ1 667 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 PI4K2BG5E9Z4 385 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 TRIM49P0CI25 452 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 TRIM49CP0CI26 452 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 GZMAP12544 262 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 EIF2B5Q13144 721 aaKnown RBP13.14□□□□□ -0.31
LMCD1-201ENST00000157600 GTF2H3Q13889 308 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 SYNE4Q8N205 404 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 TBC1D23Q9NUY8 699 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 ARHGEF38Q9NXL2 777 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 CYP26A1O43174 497 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 C21orf2O43822 256 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
LMCD1-201ENST00000157600 RABGAP1LQ5R372 815 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 NOTUMQ6P988 496 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 HIPK4Q8NE63 616 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 LRRC1Q9BTT6 524 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 OSBPL8Q9BZF1 889 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 GTF3C4Q9UKN8 822 aa13.14□□□□□ -0.31
LMCD1-201ENST00000157600 KCNA2P16389 499 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 FGFR4P22455 802 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms