RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 NWD1Q149M9 1564 aa24.33■■□□□ 1.49
TARBP1-201ENST00000040877 NAMPTP43490 491 aa24.33■■□□□ 1.49
TARBP1-201ENST00000040877 ST8SIA6P61647 398 aa24.33■■□□□ 1.49
TARBP1-201ENST00000040877 EFTUD2Q15029 972 aaKnown RBP eCLIP24.33■■□□□ 1.498e-8■■■□□ 18.5
TARBP1-201ENST00000040877 TSSK1BQ9BXA7 367 aa24.33■■□□□ 1.49
TARBP1-201ENST00000040877 FAM129AQ9BZQ8 928 aa24.33■■□□□ 1.49
TARBP1-201ENST00000040877 WWP1Q9H0M0 922 aa24.33■■□□□ 1.49
TARBP1-201ENST00000040877 IL25Q9H293 177 aa24.33■■□□□ 1.49
TARBP1-201ENST00000040877 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.33■■□□□ 1.49
TARBP1-201ENST00000040877 C17orf102A2RUQ5 167 aa24.33■■□□□ 1.48
TARBP1-201ENST00000040877 DIAPH2O60879 1101 aa24.33■■□□□ 1.48
TARBP1-201ENST00000040877 NAA30Q147X3 362 aaPredicted RBP24.33■■□□□ 1.48
TARBP1-201ENST00000040877 SLC13A1Q9BZW2 595 aa24.33■■□□□ 1.48
TARBP1-201ENST00000040877 KIAA1257Q9ULG3 409 aa24.33■■□□□ 1.48
TARBP1-201ENST00000040877 GPAT2Q6NUI2 795 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 CENPKQ9BS16 269 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 SLC37A4O43826 429 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 GRB10Q13322 594 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 PTPAQ15257 358 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 RBM15Q96T37 977 aaKnown RBP eCLIP24.32■■□□□ 1.482e-7■□□□□ 8.4
TARBP1-201ENST00000040877 ZC3H11AO75152 810 aaKnown RBP eCLIP24.32■■□□□ 1.484e-6■■■□□ 16.2
TARBP1-201ENST00000040877 SESN2P58004 480 aaPredicted RBP24.32■■□□□ 1.48
TARBP1-201ENST00000040877 ACER1Q8TDN7 264 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 VPS33BQ9H267 617 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 FBXO28Q9NVF7 368 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 NOP53Q9NZM5 478 aaKnown RBP24.32■■□□□ 1.48
TARBP1-201ENST00000040877 GTF3C4Q9UKN8 822 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 CHUKO15111 745 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 GYPCP04921 128 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 GNL1P36915 607 aaPredicted RBP24.32■■□□□ 1.48
TARBP1-201ENST00000040877 RAB6BQ9NRW1 208 aa24.32■■□□□ 1.48
TARBP1-201ENST00000040877 STK25O00506 426 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 DNAJC6O75061 913 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 EEF1B2P24534 225 aaKnown RBP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 Q4G0T1 1027 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 APRTP07741 180 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 NLRP11P59045 1033 aaKnown RBP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 CACNB2Q08289 660 aaPredicted RBP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 NFIAQ12857 509 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 HABP4Q5JVS0 413 aaKnown RBP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 ZNF512Q96ME7 567 aaPredicted RBP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 F5H423 210 aaPredicted RBP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 GARTP22102 1010 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 NLRP14Q86W24 1093 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 FEZF2Q8TBJ5 459 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 GPBP1L1Q9HC44 474 aaPredicted RBP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 PLEKHH3Q7Z736 793 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 RNF217Q8TC41 542 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 STOML1Q9UBI4 398 aa24.31■■□□□ 1.48
TARBP1-201ENST00000040877 ZC3H7BQ9UGR2 993 aaKnown RBP24.31■■□□□ 1.48
TARBP1-201ENST00000040877 SUPT20HL2P0C7V6 817 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 SEC23AQ15436 765 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 BOLA3Q53S33 107 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 CALML6Q8TD86 181 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 SH3KBP1Q96B97 665 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 TRABDQ9H4I3 376 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 TRPA1O75762 1119 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 NPTXRO95502 500 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 HADHAP40939 763 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 ZKSCAN4Q969J2 545 aaPredicted RBP24.3■■□□□ 1.48
TARBP1-201ENST00000040877 MRGBPQ9NV56 204 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 TMEM62Q0P6H9 643 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 MTBPQ96DY7 904 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 KIFC3Q9BVG8 833 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 PRRG1O14668 218 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 FAM200BP0CF97 657 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 THOC1Q96FV9 657 aaKnown RBP24.3■■□□□ 1.48
TARBP1-201ENST00000040877 SLITRK1Q96PX8 696 aa24.3■■□□□ 1.48
TARBP1-201ENST00000040877 COMTP21964 271 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 LBRQ14739 615 aaKnown RBP24.29■■□□□ 1.48
TARBP1-201ENST00000040877 PCNX4Q63HM2 1172 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 PBXIP1Q96AQ6 731 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 VSNL1P62760 191 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 RAD9BQ6WBX8 426 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 ANKS1AQ92625 1134 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 DACT3Q96B18 629 aaPredicted RBP24.29■■□□□ 1.48
TARBP1-201ENST00000040877 TEX12Q9BXU0 123 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 FAM49BQ9NUQ9 324 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 DCTN4Q9UJW0 460 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 ALG6Q9Y672 507 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 MST1RQ04912 1400 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 KITP10721 976 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 CUL2Q13617 745 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 ASPSCR1Q9BZE9 553 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 RIOX1Q9H6W3 641 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 AIPL1Q9NZN9 384 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 RIMS1Q86UR5 1692 aaKnown RBP24.29■■□□□ 1.48
TARBP1-201ENST00000040877 CCDC195A0A1B0GUA6 201 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 HNRNPCL1O60812 293 aaKnown RBP24.29■■□□□ 1.48
TARBP1-201ENST00000040877 E2F6O75461 281 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 FGFR4P22455 802 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 PTK2BQ14289 1009 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 GOLGA7BQ2TAP0 167 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 LBHD1Q9BQE6 289 aaPredicted RBP24.29■■□□□ 1.48
TARBP1-201ENST00000040877 TSPYL2Q9H2G4 693 aaPredicted RBP24.29■■□□□ 1.48
TARBP1-201ENST00000040877 NEU2Q9Y3R4 380 aa24.29■■□□□ 1.48
TARBP1-201ENST00000040877 FAM205AQ6ZU69 1335 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 STAG3L1P0CL83 205 aa24.28■■□□□ 1.48
TARBP1-201ENST00000040877 CAPRIN1Q14444 709 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms