RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 BEND6Q5SZJ8 279 aaPredicted RBP23.62■■□□□ 1.37
HOXC8-201ENST00000040584 LPPQ93052 612 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 GPR88Q9GZN0 384 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 APOBEC3GQ9HC16 384 aaKnown RBP23.62■■□□□ 1.37
HOXC8-201ENST00000040584 ARHGAP20Q9P2F6 1191 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 SIX4Q9UIU6 781 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 CCDC66A2RUB6 948 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 SASH3O75995 380 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 CLSTN1O94985 981 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 KRT19P08727 400 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 ITGA4P13612 1032 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 VAV2P52735 878 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 ARID5AQ03989 594 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 NECAB2Q7Z6G3 386 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 NT5DC4Q86YG4 428 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 SCLYQ96I15 445 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 KREMEN1Q96MU8 473 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 TRAIPQ9BWF2 469 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 C1orf112Q9NSG2 853 aa23.62■■□□□ 1.37
HOXC8-201ENST00000040584 ITGB3P05106 788 aa23.61■■□□□ 1.37
HOXC8-201ENST00000040584 CCL23P55773 120 aa23.61■■□□□ 1.37
HOXC8-201ENST00000040584 XKR4Q5GH76 650 aa23.61■■□□□ 1.37
HOXC8-201ENST00000040584 RTN4RL1Q86UN2 441 aaPredicted RBP23.61■■□□□ 1.37
HOXC8-201ENST00000040584 DPP3Q9NY33 737 aa23.61■■□□□ 1.37
HOXC8-201ENST00000040584 DERAQ9Y315 318 aa23.61■■□□□ 1.37
HOXC8-201ENST00000040584 RALGAPA2Q2PPJ7 1873 aa23.61■■□□□ 1.37
HOXC8-201ENST00000040584 A0A0U1RQF3 1178 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 SMIM28A0A1B0GU29 152 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 PLEKP08567 350 aaPredicted RBP23.6■■□□□ 1.37
HOXC8-201ENST00000040584 CYP2C18P33260 490 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 NOP14P78316 857 aaKnown RBP23.6■■□□□ 1.37
HOXC8-201ENST00000040584 ZBTB6Q15916 424 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 IRF2BP2Q7Z5L9 587 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 MRPL10Q7Z7H8 261 aaKnown RBP23.6■■□□□ 1.37
HOXC8-201ENST00000040584 HACE1Q8IYU2 909 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 RNF169Q8NCN4 708 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 CXorf38Q8TB03 319 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 C18orf25Q96B23 403 aaPredicted RBP23.6■■□□□ 1.37
HOXC8-201ENST00000040584 WNT8AQ9H1J5 351 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 ACBD3Q9H3P7 528 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 NUB1Q9Y5A7 615 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 FOXN3O00409 490 aaPredicted RBP23.6■■□□□ 1.37
HOXC8-201ENST00000040584 ZNF623O75123 536 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 ASS1P00966 412 aaKnown RBP23.6■■□□□ 1.37
HOXC8-201ENST00000040584 SERPING1P05155 500 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 STAT1P42224 750 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 RAB27AP51159 221 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 MFAP3P55082 362 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 AGMOQ6ZNB7 445 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 ZFP42Q96MM3 310 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 IMPG2Q9BZV3 1241 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 RGS18Q9NS28 235 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 TUBGCP4Q9UGJ1 667 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 TBX21Q9UL17 535 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 L1RE1Q9UN81 338 aa23.6■■□□□ 1.37
HOXC8-201ENST00000040584 TARSL2A2RTX5 802 aaKnown RBP23.59■■□□□ 1.37
HOXC8-201ENST00000040584 LCA5LO95447 670 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 KCNE1P15382 129 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 SOX5P35711 763 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 ASIC2Q16515 512 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 SGSM1Q2NKQ1 1148 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 DBF4BQ8NFT6 615 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 TRIM58Q8NG06 486 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 LINC01599Q8WXQ3 324 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 XYLT2Q9H1B5 865 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 TMEM39AQ9NV64 488 aa23.59■■□□□ 1.37
HOXC8-201ENST00000040584 GFPT2O94808 682 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 PRLRP16471 622 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 ATF7P17544 494 aaPredicted RBP23.58■■□□□ 1.37
HOXC8-201ENST00000040584 EN2P19622 333 aaPredicted RBP23.58■■□□□ 1.37
HOXC8-201ENST00000040584 POLR2BP30876 1174 aaKnown RBP23.58■■□□□ 1.37
HOXC8-201ENST00000040584 MLH1P40692 756 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 GCNT1Q02742 428 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 MAP9Q49MG5 647 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 PLEKHG4Q58EX7 1191 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 GAD1Q99259 594 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 ITGA11Q9UKX5 1188 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 AGAP1Q9UPQ3 857 aa23.58■■□□□ 1.37
HOXC8-201ENST00000040584 SSU72P8A0A1W2PR75 194 aa23.58■■□□□ 1.36
HOXC8-201ENST00000040584 CLTBP09497 229 aa23.58■■□□□ 1.36
HOXC8-201ENST00000040584 OAS2P29728 719 aaKnown RBP23.58■■□□□ 1.36
HOXC8-201ENST00000040584 PRKCIP41743 596 aa23.58■■□□□ 1.36
HOXC8-201ENST00000040584 AFF1P51825 1210 aaKnown RBP23.58■■□□□ 1.36
HOXC8-201ENST00000040584 MAPK8IP2Q13387 824 aaPredicted RBP23.58■■□□□ 1.36
HOXC8-201ENST00000040584 ZNF699Q32M78 642 aa23.58■■□□□ 1.36
HOXC8-201ENST00000040584 ECHDC2Q86YB7 292 aa23.58■■□□□ 1.36
HOXC8-201ENST00000040584 FMNL3Q8IVF7 1028 aa23.58■■□□□ 1.36
HOXC8-201ENST00000040584 SECISBP2LQ93073 1101 aaKnown RBP23.58■■□□□ 1.36
HOXC8-201ENST00000040584 PTGESO14684 152 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 TACC1O75410 805 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 CAPN2P17655 700 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 EIF4A3P38919 411 aaKnown RBP23.57■■□□□ 1.36
HOXC8-201ENST00000040584 KLHL30Q0D2K2 578 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 ASTE1Q2TB18 679 aaPredicted RBP23.57■■□□□ 1.36
HOXC8-201ENST00000040584 GSTCDQ8NEC7 633 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 BEST2Q8NFU1 509 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 SHC3Q92529 594 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 PNKPQ96T60 521 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 FTHL17Q9BXU8 183 aa23.57■■□□□ 1.36
HOXC8-201ENST00000040584 ST7Q9NRC1 585 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms