RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Sh3gl1Q62419 368 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gpr156Q6PCP7 798 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 PisdQ8BSF4 406 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 VillQ91YD6 859 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Lztr1Q9CQ33 837 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pdk2Q9JK42 407 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Plekhg4A0A1L1SU27 1217 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mindy4b-psA0A1W2P7H6 457 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 4933406M09RikG3XA12 479 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm10721J3QPJ9 223 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cdc6O89033 562 aaKnown RBP10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 PkmP52480 531 aaKnown RBP10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Arpp19P56212 112 aaKnown RBP10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gng11P61953 73 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Plk1Q07832 603 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ccdc42Q5SV66 316 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Sh3tc2Q80VA5 1289 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 NrcamQ810U4 1256 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Maip1Q8BHE8 291 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Znf473Q8BI67 892 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Slc9a7Q8BLV3 726 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Unc45bQ8CGY6 931 aaKnown RBP10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pcyox1Q9CQF9 505 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Acsl3Q9CZW4 720 aaKnown RBP10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Dnajb4Q9D832 337 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Dpy19l4A2AJQ3 722 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gcom1E9PZ54 550 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Xirp1O70373 1129 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ifnar1P33896 590 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 NcanP55066 1268 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ugt1a2P70691 533 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pou6f1Q07916 301 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 MyzapQ3UIJ9 466 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ugt1a9Q62452 528 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ugt1a1Q63886 535 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Papd5Q68ED3 633 aaKnown RBP10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 PrcpQ7TMR0 491 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Suz12Q80U70 741 aaKnown RBP10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Clec1aQ8BWY2 269 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Syt15Q8C6N3 418 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ca12Q8CI85 354 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pcdhb2Q91Y00 799 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rnf34Q99KR6 376 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gstt4Q9D4P7 240 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Scyl3Q9DBQ7 735 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 FignQ9ERZ6 759 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Eif2ak3Q9Z2B5 1114 aa10.6□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gjb3P28231 270 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Rmdn3Q3UJU9 470 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Trim25Q61510 634 aaKnown RBP10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tspan18Q80WR1 248 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gtf2a2Q80ZM7 109 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Frmd3Q8BHD4 595 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pum3Q8BKS9 647 aaKnown RBP10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Smoc2Q8CD91 447 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tada2aQ8CHV6 443 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cpa5Q8R4H4 436 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Pcdhgb4Q91XX6 912 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Sertad2Q9JJG5 309 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Klra17Q9JMA4 273 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tnni1Q9WUZ5 187 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm281D3Z1Y0 860 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Kdelc2G5E897 503 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Bcl7cO08664 217 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Fgfr1P16092 822 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gdf6P43028 454 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ephb4P54761 987 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Smyd1P97443 490 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Krt86P97861 486 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Bpifa6Q0VGU8 367 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Oca2Q62052 833 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Inppl1Q6P549 1257 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Cd300lfQ6SJQ7 337 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Olfr670Q7TRP3 312 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Lig4Q8BTF7 911 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 ClasrpQ8CFC7 668 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Bzw2Q91VK1 419 aaKnown RBP10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Q91Z58 1206 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Luc7lQ9CYI4 371 aaKnown RBP10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Trhr2Q9ERT2 382 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm12394A2AKP6 982 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Olfr743L7N1Y2 311 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ass1P16460 412 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Gm5935Q497S0 212 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Syce2Q505B8 171 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mapk6Q61532 720 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Panx2Q6IMP4 677 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mettl25Q6NXH8 597 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Lrig3Q6P1C6 1117 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Tlr11Q6R5P0 926 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Polr2eQ80UW8 210 aaKnown RBP10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 PdhxQ8BKZ9 501 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Mical2Q8BML1 960 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Uba3Q8C878 462 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Ifi35Q9D8C4 286 aa10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Dkc1Q9ESX5 509 aaKnown RBP10.59□□□□□ -0.71
Ccdc38-201ENSMUST00000092215 Wdr81Q5ND34 1934 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Spata31d1dE9Q5W2 1247 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm3127E9Q9P5 263 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm3453K7N724 263 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms