RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Oprl1P35377 367 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Abi2P62484 446 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Trim72Q1XH17 477 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ppp1r1bQ60829 194 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 RimklbQ80WS1 387 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Fam204aQ8C6C7 236 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 PhykplQ8R1K4 467 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rilpl1Q9JJC6 406 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Prmt2Q9R144 448 aa10.27□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Mical3Q8CJ19 1993 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 AspgA0JNU3 564 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Lonrf1D3YY23 762 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Usp35M0QWN7 1009 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nedd9O35177 833 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nrg3O35181 713 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tnnc2P20801 160 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Sstr1P30873 391 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Msh2P43247 935 aaKnown RBP10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Myl2P51667 166 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Bace1P56818 501 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Psmc1P62192 440 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rad54lP70270 747 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Caprin2Q05A80 1031 aaKnown RBP10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Edem3Q2HXL6 931 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Mphosph8Q3TYA6 858 aaKnown RBP10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Znf746Q3U133 652 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gigyf2Q6Y7W8 1291 aaKnown RBP10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zswim6Q80TB7 1207 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rimbp2Q80U40 1072 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Polr2bQ8CFI7 1174 aaKnown RBP10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tmem206Q9D771 350 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Prl2b1Q9DAZ2 228 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pdk2Q9JK42 407 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tmod4Q9JLH8 345 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Phf2Q9WTU0 1096 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Card9A2AIV8 536 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Unc13dB2RUP2 1085 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Apol11aE9PZG0 334 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 KitP05532 979 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Arl4cP61208 192 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Grm2Q14BI2 872 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cnot7Q60809 285 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Trpa1Q8BLA8 1125 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rfx6Q8C7R7 927 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Znf445Q8R2V3 986 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cdk9Q99J95 372 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cdc26Q99JP4 85 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Slc39a3Q99K24 317 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nme5Q99MH5 211 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Abcg8Q9DBM0 673 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tsc1Q9EP53 1161 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Adrm1Q9JKV1 407 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Prdm12A2AJ77 365 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 LipeP54310 759 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 GclcP97494 637 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Stip1Q60864 543 aaKnown RBP10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Q80ZQ3 298 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Atp2a1Q8R429 994 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cep83Q9D5R3 692 aa10.26□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pus7B7ZNL8 666 aaKnown RBP10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm45837F7D3W5 961 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Itgb5O70309 798 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Zfy1P10925 782 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 S100a5P63084 93 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 4933427I04RikQ3V053 235 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm14685Q52KH6 695 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 CpQ61147 1061 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gpr150Q8BL07 427 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pak4Q8BTW9 593 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pih1h3bQ8C6P5 218 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pde2aQ922S4 916 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 St13Q99L47 371 aaKnown RBP10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Arfgef1G3X9K3 1846 aaKnown RBP10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ltbp2O08999 1813 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 C130060K24RikG3UWA8 416 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Mmp15O54732 657 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rpl7aP12970 266 aaKnown RBP10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 GzmgP13366 248 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 PkmP52480 531 aaKnown RBP10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nrp1P97333 923 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 GsapQ3TCV3 858 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rufy4Q3TYX8 563 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Mysm1Q69Z66 819 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Agap1Q8BXK8 857 aaKnown RBP10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 CenpuQ8C4M7 410 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Nrbp2Q91V36 499 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tmem79Q9D709 391 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Rbp7Q9EPC5 134 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Krt90E9Q1Z0 538 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Spata31d1dE9Q5W2 1247 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Gm3460E9QAI8 215 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 AgxtO35423 414 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Per2O54943 1257 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Pde8aO88502 823 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Bmp2P21274 394 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Ripk2P58801 539 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Klrb1Q0ZUP1 214 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Cyp2j11Q3UNV2 504 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Tfap2bQ61313 459 aa10.25□□□□□ -0.77
Pcdh1-201ENSMUST00000057185 Xpnpep1Q6P1B1 623 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms