RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Atp5bP56480 529 aaKnown RBP17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Npdc1Q64322 332 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 SucoQ8C341 1250 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Unc45aQ99KD5 944 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Katnal2Q9D3R6 539 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Spag17Q5S003 2320 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm2832F7AEC7 200 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 1600015I10RikE9Q745 711 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 ZfrO88532 1074 aaKnown RBP17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Hdac10Q6P3E7 666 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ppp1r37Q8BKR5 712 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Psmd12Q9D8W5 456 aa17.32■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Cdo1P60334 200 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Vsnl1P62761 191 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tekt4Q149S1 447 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Lrrc14Q8VC16 493 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 CbsQ91WT9 561 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Lrrc17Q9CXD9 443 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Flt4P35917 1363 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Snap23O09044 210 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 MpndQ3TV65 487 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Xpo1Q6P5F9 1071 aaKnown RBP17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Amhr2Q8K592 568 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Golph3Q9CRA5 298 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Poc5Q9DBS8 558 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Rnf103Q9R1W3 683 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tarbp1E9Q368 1579 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 CrnnD3YUU6 520 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Aco1P28271 889 aaKnown RBP17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Oas1fQ14AZ4 364 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Togaram2Q3TYG6 1002 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ogfod1Q3U0K8 545 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Vmn2r43Q80Z08 845 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Strip1Q8C079 837 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tbc1d22aQ8R5A6 516 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm29276A0A087WNW5 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21117A0A087WPJ9 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm20820A0A087WPP3 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm20937A0A087WQA3 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21258A0A087WQC7 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm28102A0A087WQL3 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21095A0A087WR14 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm20792A0A087WRF5 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21865A0A087WRL2 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm28576A0A087WRP6 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm28490A0A087WRT9 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21294A0A087WS79 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm20824A0A087WS97 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21996A0A087WSS9 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm28870A0A0A6YW38 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm29866A0A0A6YX04 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 OsbpQ3B7Z2 805 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Eif1adQ3THJ3 170 aaKnown RBP17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21627Q810R0 219 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 A430089I19RikQ8C9W1 407 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Nckap1lQ8K1X4 1134 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Pcdha9Q91Y11 979 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 YwhabQ9CQV8 246 aaKnown RBP17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Habp4Q9JKS5 411 aaKnown RBP17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Fcho1Q8K285 873 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Hars2Q99KK9 505 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tns3Q5SSZ5 1440 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Kiaa1210E9Q0C6 1637 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Adcy1O88444 1118 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Trim9Q8C7M3 817 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 ChiaQ91XA9 473 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 BrdtQ91Y44 956 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Actl7aQ9QY84 440 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Acnat1A2AKK5 416 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Vps72Q62481 368 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ube2oQ6ZPJ3 1288 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Slc6a15Q8BG16 729 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Psmd9Q9CR00 222 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tmem47Q9JJG6 181 aa17.31■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Znf711A2ANX9 761 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Usp53P15975 1069 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Clec4fP70194 548 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Ptprn2P80560 1001 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Nfe2Q07279 373 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Dlgap3Q6PFD5 977 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tmem120aQ8C1E7 343 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Alx1Q8C8B0 326 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Erap1Q9EQH2 930 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Gm21497A0A087WRK3 222 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Smyd3Q9CWR2 428 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 PltpP55065 493 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Sec31aQ3UPL0 1230 aaKnown RBP17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Islr2Q5RKR3 745 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Dhx35A2ACQ1 703 aaKnown RBP17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 CblP22682 913 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Cdk4P30285 303 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Fam228bQ497Q6 232 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Sptlc3Q8BG54 563 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Drd5Q8BLD9 478 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 NcaphQ8C156 731 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 CopaQ8CIE6 1224 aaKnown RBP17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Fam162aQ9D6U8 155 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Psma4Q9R1P0 261 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Nme3Q9WV85 169 aa17.3■□□□□ 0.36
Ccdc88a-201ENSMUST00000040182 Tmem26Q3UP23 366 aa17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms