RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Capn13Q3UW68 665 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Atp13a3Q5XF89 1219 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Chi3l1Q61362 389 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Acap2Q6ZQK5 770 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Mtrf1lQ8BJU9 373 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Adgra1Q8C4G9 578 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Leg1Q8C6C9 337 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Pdk2Q9JK42 407 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ift172Q6VH22 1749 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Pnpla6Q3TRM4 1355 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Usp17lbE9Q9U0 468 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Mfsd4b4J3QNS5 503 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Vti1aO89116 217 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Sash1P59808 1230 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rnf113a2Q14B01 337 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Tigd5Q499M4 642 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Abl2Q4JIM5 1182 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Phactr4Q501J7 694 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rpf1Q7TND5 349 aaKnown RBP13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ip6k2Q80V72 448 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Nlrp4aQ8BU40 982 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rhpn2Q8BWR8 686 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Asb11Q9CQ31 323 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ccdc130Q9D516 385 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Kcnq4Q9JK97 696 aa13.32□□□□□ -0.28
Msh6-201ENSMUST00000005503 Anxa8O35640 327 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Edem3Q2HXL6 931 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Klra3Q64329 266 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Vmn2r43Q80Z08 845 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ppfia2Q8BSS9 1257 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Alg9Q8VDI9 611 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Gm6370A0A0G2JGX9 315 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 4930544D05RikJ3QK56 214 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Gm6309L7N481 315 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Dync1i2O88487 612 aaKnown RBP13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Bmp2P21274 394 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rad54lP70270 747 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Atp11aP98197 1187 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Hace1Q3U0D9 909 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Parp3Q3ULW8 533 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Znf12Q7TSI0 686 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ptrh1Q8BW00 204 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Tekt1Q9DAJ2 418 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ugt1a2P70691 533 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Q3TQQ9 903 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Orc2Q60862 576 aaKnown RBP13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Plk4Q64702 925 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Zswim5Q80TC6 1188 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Dnajc6Q80TZ3 938 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Med21Q9CQ39 144 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Sh2d3cQ9QZS8 854 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Nme3Q9WV85 169 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Myh7bA2AQP0 1941 aa13.31□□□□□ -0.28
Msh6-201ENSMUST00000005503 Fam71aB7XG49 585 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 1700122O11RikJ3QPW6 241 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Hmgb2P30681 210 aaKnown RBP13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ddr1Q03146 911 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Prkaa1Q5EG47 559 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Stx3Q64704 289 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Catsper3Q80W99 395 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Dcun1d2Q8BZJ7 259 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Snx30Q8CE50 437 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Sugp1Q8CH02 643 aaKnown RBP13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 HnmtQ91VF2 295 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 NcaldQ91X97 193 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rbp7Q9EPC5 134 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rnf14Q9JI90 485 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 EmcnQ9R0H2 261 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 FechP22315 420 aaKnown RBP13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Msh2P43247 935 aaKnown RBP13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Cdc25cP48967 447 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Psma2P49722 234 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 GalcP54818 684 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rit2P70425 217 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ccdc127Q3TC33 260 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rmdn3Q3UJU9 470 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Cyp2j11Q3UNV2 504 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 R3hdm4Q4VBF2 262 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Gpatch2lQ6PE65 482 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Wdr60Q8C761 999 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Rpa3Q9CQ71 121 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Cyp39a1Q9JKJ9 470 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Lrrc23O35125 340 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 PigrO70570 771 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 SftpdP50404 374 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Atp6v1b2P62814 511 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Gm3414Q3TNU4 584 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Trim38Q5SZ99 471 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Ahcyl2Q68FL4 613 aaKnown RBP13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Adprhl2Q8CG72 370 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Cyp2d26Q8CIM7 500 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Agap3Q8VHH5 910 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Map2P20357 1828 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Astn1Q61137 1302 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Mageb2A2AHM0 380 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 AfpP02772 605 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Cdo1P60334 200 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Meis2P97367 477 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Sox10Q04888 466 aa13.3□□□□□ -0.28
Msh6-201ENSMUST00000005503 Agxt2Q3UEG6 513 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms