RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 RAB3GAP2Q9H2M9 1393 aa15.35■□□□□ 0.05
CASC19-247ENST00000641642 TIE1P35590 1138 aa15.33■□□□□ 0.04
CASC19-247ENST00000641642 KIF3BO15066 747 aa15.31■□□□□ 0.04
CASC19-247ENST00000641642 SGIP1Q9BQI5 828 aa15.31■□□□□ 0.04
CASC19-247ENST00000641642 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
CASC19-247ENST00000641642 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
CASC19-247ENST00000641642 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
CASC19-247ENST00000641642 RNF17Q9BXT8 1623 aaKnown RBP15.3■□□□□ 0.04
CASC19-247ENST00000641642 UNC13BO14795 1591 aa15.29■□□□□ 0.04
CASC19-247ENST00000641642 KANK1Q14678 1352 aa15.29■□□□□ 0.04
CASC19-247ENST00000641642 KDM5DQ9BY66 1539 aa15.28■□□□□ 0.04
CASC19-247ENST00000641642 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.03
CASC19-247ENST00000641642 NUP155O75694 1391 aa15.25■□□□□ 0.03
CASC19-247ENST00000641642 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
CASC19-247ENST00000641642 VWDEQ8N2E2 1590 aa15.24■□□□□ 0.03
CASC19-247ENST00000641642 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
CASC19-247ENST00000641642 GGT6Q6P531 493 aa15.24■□□□□ 0.03
CASC19-247ENST00000641642 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
CASC19-247ENST00000641642 LMTK2Q8IWU2 1503 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 TTLL13PA6NNM8 815 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 MROH1Q8NDA8 1641 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
CASC19-247ENST00000641642 FAM212AQ96EL1 285 aa15.22■□□□□ 0.03
CASC19-247ENST00000641642 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
CASC19-247ENST00000641642 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
CASC19-247ENST00000641642 SIGLEC1Q9BZZ2 1709 aa15.2■□□□□ 0.02
CASC19-247ENST00000641642 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
CASC19-247ENST00000641642 MPHOSPH9Q99550 1183 aa15.2■□□□□ 0.02
CASC19-247ENST00000641642 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
CASC19-247ENST00000641642 PZPP20742 1482 aa15.19■□□□□ 0.02
CASC19-247ENST00000641642 CLSPNQ9HAW4 1339 aa15.18■□□□□ 0.02
CASC19-247ENST00000641642 MAMSTRQ6ZN01 415 aa15.18■□□□□ 0.02
CASC19-247ENST00000641642 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
CASC19-247ENST00000641642 TET3O43151 1660 aa15.18■□□□□ 0.02
CASC19-247ENST00000641642 ARHGAP31Q2M1Z3 1444 aa15.17■□□□□ 0.02
CASC19-247ENST00000641642 ABCC3O15438 1527 aa15.17■□□□□ 0.02
CASC19-247ENST00000641642 DHX57Q6P158 1386 aaKnown RBP15.16■□□□□ 0.02
CASC19-247ENST00000641642 IFNL1Q8IU54 200 aa15.15■□□□□ 0.02
CASC19-247ENST00000641642 MROH2AA6NES4 1674 aa15.15■□□□□ 0.02
CASC19-247ENST00000641642 EFCAB6Q5THR3 1501 aa15.14■□□□□ 0.01
CASC19-247ENST00000641642 MLECQ14165 292 aa15.14■□□□□ 0.01
CASC19-247ENST00000641642 ADAMTSL3P82987 1691 aa15.13■□□□□ 0.01
CASC19-247ENST00000641642 CEP152O94986 1710 aa15.13■□□□□ 0.01
CASC19-247ENST00000641642 PKD2Q13563 968 aa15.13■□□□□ 0.01
CASC19-247ENST00000641642 IER5LQ5T953 404 aa15.12■□□□□ 0.01
CASC19-247ENST00000641642 CAMSAP1Q5T5Y3 1602 aa15.12■□□□□ 0.01
CASC19-247ENST00000641642 FER1L4A9Z1Z3 1794 aa15.11■□□□□ 0.01
CASC19-247ENST00000641642 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
CASC19-247ENST00000641642 CLTCQ00610 1675 aaKnown RBP15.1■□□□□ 0.01
CASC19-247ENST00000641642 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
CASC19-247ENST00000641642 COLQQ9Y215 455 aaPredicted RBP15.1■□□□□ 0.01
CASC19-247ENST00000641642 E9PCH4 1651 aa15.09■□□□□ 0.01
CASC19-247ENST00000641642 NPATQ14207 1427 aa15.09■□□□□ 0.01
CASC19-247ENST00000641642 PTPRTO14522 1441 aa15.09■□□□□ 0.01
CASC19-247ENST00000641642 CCER1Q8TC90 406 aaPredicted RBP15.08■□□□□ 0
CASC19-247ENST00000641642 ANKRD30BQ9BXX2 1392 aa15.08■□□□□ 0
CASC19-247ENST00000641642 SCUBE2Q9NQ36 999 aa15.07■□□□□ 0
CASC19-247ENST00000641642 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
CASC19-247ENST00000641642 NOS1P29475 1434 aa15.06■□□□□ 0
CASC19-247ENST00000641642 MADDQ8WXG6 1647 aa15.06■□□□□ 0
CASC19-247ENST00000641642 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
CASC19-247ENST00000641642 SETD1BQ9UPS6 1966 aaKnown RBP15.04■□□□□ -0
CASC19-247ENST00000641642 SPHKAPQ2M3C7 1700 aa15.04■□□□□ -0
CASC19-247ENST00000641642 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
CASC19-247ENST00000641642 TRPM2O94759 1503 aa15.04■□□□□ -0
CASC19-247ENST00000641642 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
CASC19-247ENST00000641642 PREX1Q8TCU6 1659 aa15.03■□□□□ -0
CASC19-247ENST00000641642 ERVK-7P63135 1459 aa15.02■□□□□ -0
CASC19-247ENST00000641642 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
CASC19-247ENST00000641642 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
CASC19-247ENST00000641642 C3P01024 1663 aa15.02□□□□□ -0.01
CASC19-247ENST00000641642 CFAP65Q6ZU64 1925 aaKnown RBP15.02□□□□□ -0.01
CASC19-247ENST00000641642 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
CASC19-247ENST00000641642 CCDC144AA2RUR9 1427 aa15.01□□□□□ -0.01
CASC19-247ENST00000641642 TIMELESSQ9UNS1 1208 aa15.01□□□□□ -0.01
CASC19-247ENST00000641642 NEURL4Q96JN8 1562 aa15□□□□□ -0.01
CASC19-247ENST00000641642 POTEMA6NI47 508 aa15□□□□□ -0.01
CASC19-247ENST00000641642 SEC24BO95487 1268 aa15□□□□□ -0.01
CASC19-247ENST00000641642 PTPRMP28827 1452 aa15□□□□□ -0.01
CASC19-247ENST00000641642 PYGBP11216 843 aa14.99□□□□□ -0.01
CASC19-247ENST00000641642 TNRQ92752 1358 aa14.98□□□□□ -0.01
CASC19-247ENST00000641642 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
CASC19-247ENST00000641642 PIK3C2BO00750 1634 aa14.97□□□□□ -0.01
CASC19-247ENST00000641642 KDM4FA0A1W2PPD8 638 aa14.97□□□□□ -0.01
CASC19-247ENST00000641642 LCE2DQ5TA82 110 aaPredicted RBP14.97□□□□□ -0.01
CASC19-247ENST00000641642 FBXO31Q5XUX0 539 aaPredicted RBP14.97□□□□□ -0.01
CASC19-247ENST00000641642 SYNMO15061 1565 aa14.96□□□□□ -0.01
CASC19-247ENST00000641642 POTEGQ6S5H5 508 aa14.96□□□□□ -0.01
CASC19-247ENST00000641642 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
CASC19-247ENST00000641642 CEBPAP49715 358 aaPredicted RBP14.95□□□□□ -0.02
CASC19-247ENST00000641642 KDM5AP29375 1690 aaKnown RBP14.95□□□□□ -0.02
CASC19-247ENST00000641642 KIF1BO60333 1816 aa14.94□□□□□ -0.02
CASC19-247ENST00000641642 IDI1Q13907 227 aa14.94□□□□□ -0.02
CASC19-247ENST00000641642 CLTCL1P53675 1640 aa14.93□□□□□ -0.02
CASC19-247ENST00000641642 ZEB1P37275 1124 aaPredicted RBP14.93□□□□□ -0.02
CASC19-247ENST00000641642 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
CASC19-247ENST00000641642 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
CASC19-247ENST00000641642 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms