RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 PTPRTO14522 1441 aa13.46□□□□□ -0.26
SAMMSON-218ENST00000641601 ZFYVE16Q7Z3T8 1539 aa13.46□□□□□ -0.26
SAMMSON-218ENST00000641601 MS4A1P11836 297 aa13.45□□□□□ -0.26
SAMMSON-218ENST00000641601 CC2D1BQ5T0F9 858 aaKnown RBP13.45□□□□□ -0.26
SAMMSON-218ENST00000641601 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
SAMMSON-218ENST00000641601 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
SAMMSON-218ENST00000641601 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
SAMMSON-218ENST00000641601 MYOM1P52179 1685 aa13.43□□□□□ -0.26
SAMMSON-218ENST00000641601 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
SAMMSON-218ENST00000641601 VWDEQ8N2E2 1590 aa13.43□□□□□ -0.26
SAMMSON-218ENST00000641601 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
SAMMSON-218ENST00000641601 CDCA7LQ96GN5 454 aa13.42□□□□□ -0.26
SAMMSON-218ENST00000641601 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
SAMMSON-218ENST00000641601 INO80Q9ULG1 1556 aaPredicted RBP13.42□□□□□ -0.26
SAMMSON-218ENST00000641601 ASXL1Q8IXJ9 1541 aa13.41□□□□□ -0.26
SAMMSON-218ENST00000641601 SALL2Q9Y467 1007 aaPredicted RBP13.41□□□□□ -0.26
SAMMSON-218ENST00000641601 KDM5AP29375 1690 aaKnown RBP13.41□□□□□ -0.26
SAMMSON-218ENST00000641601 PIK3C2GO75747 1445 aa13.4□□□□□ -0.26
SAMMSON-218ENST00000641601 FAM69CQ0P6D2 419 aa13.4□□□□□ -0.26
SAMMSON-218ENST00000641601 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
SAMMSON-218ENST00000641601 PPP6R1Q9UPN7 881 aa13.4□□□□□ -0.26
SAMMSON-218ENST00000641601 ABCA9Q8IUA7 1624 aa13.4□□□□□ -0.26
SAMMSON-218ENST00000641601 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
SAMMSON-218ENST00000641601 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
SAMMSON-218ENST00000641601 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
SAMMSON-218ENST00000641601 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
SAMMSON-218ENST00000641601 PIAS4Q8N2W9 510 aaPredicted RBP13.38□□□□□ -0.27
SAMMSON-218ENST00000641601 ATP7AQ04656 1500 aa13.38□□□□□ -0.27
SAMMSON-218ENST00000641601 PDE4AP27815 886 aa13.37□□□□□ -0.27
SAMMSON-218ENST00000641601 AMER1Q5JTC6 1135 aaPredicted RBP13.37□□□□□ -0.27
SAMMSON-218ENST00000641601 BACH2Q9BYV9 841 aa13.37□□□□□ -0.27
SAMMSON-218ENST00000641601 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
SAMMSON-218ENST00000641601 MYOM2P54296 1465 aa13.37□□□□□ -0.27
SAMMSON-218ENST00000641601 IFT172Q9UG01 1749 aa13.37□□□□□ -0.27
SAMMSON-218ENST00000641601 SLC24A1O60721 1099 aa13.36□□□□□ -0.27
SAMMSON-218ENST00000641601 KANK1Q14678 1352 aa13.36□□□□□ -0.27
SAMMSON-218ENST00000641601 MAP3K4Q9Y6R4 1608 aa13.36□□□□□ -0.27
SAMMSON-218ENST00000641601 ZNF521Q96K83 1311 aa13.36□□□□□ -0.27
SAMMSON-218ENST00000641601 ADRA2BP18089 450 aa13.35□□□□□ -0.27
SAMMSON-218ENST00000641601 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
SAMMSON-218ENST00000641601 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
SAMMSON-218ENST00000641601 KIF1BO60333 1816 aa13.35□□□□□ -0.27
SAMMSON-218ENST00000641601 ASXL2Q76L83 1435 aa13.35□□□□□ -0.27
SAMMSON-218ENST00000641601 CRBNQ96SW2 442 aa13.34□□□□□ -0.27
SAMMSON-218ENST00000641601 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
SAMMSON-218ENST00000641601 MYO3AQ8NEV4 1616 aa13.34□□□□□ -0.27
SAMMSON-218ENST00000641601 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
SAMMSON-218ENST00000641601 ABCA6Q8N139 1617 aa13.34□□□□□ -0.27
SAMMSON-218ENST00000641601 PLIN1O60240 522 aa13.32□□□□□ -0.28
SAMMSON-218ENST00000641601 DUSP27Q5VZP5 1158 aa13.32□□□□□ -0.28
SAMMSON-218ENST00000641601 FANCAO15360 1455 aa13.32□□□□□ -0.28
SAMMSON-218ENST00000641601 AFAP1Q8N556 730 aa13.32□□□□□ -0.28
SAMMSON-218ENST00000641601 EFCAB6Q5THR3 1501 aa13.31□□□□□ -0.28
SAMMSON-218ENST00000641601 KDM2BQ8NHM5 1336 aa13.31□□□□□ -0.28
SAMMSON-218ENST00000641601 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
SAMMSON-218ENST00000641601 ERVK-7P63135 1459 aa13.3□□□□□ -0.28
SAMMSON-218ENST00000641601 NBR1Q14596 966 aa13.3□□□□□ -0.28
SAMMSON-218ENST00000641601 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.3□□□□□ -0.28
SAMMSON-218ENST00000641601 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
SAMMSON-218ENST00000641601 TRMT2AQ8IZ69 625 aaKnown RBP13.29□□□□□ -0.28
SAMMSON-218ENST00000641601 NGEFQ8N5V2 710 aa13.29□□□□□ -0.28
SAMMSON-218ENST00000641601 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
SAMMSON-218ENST00000641601 SBNO2Q9Y2G9 1366 aa13.29□□□□□ -0.28
SAMMSON-218ENST00000641601 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
SAMMSON-218ENST00000641601 CENPQQ7L2Z9 268 aaPredicted RBP13.29□□□□□ -0.28
SAMMSON-218ENST00000641601 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
SAMMSON-218ENST00000641601 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
SAMMSON-218ENST00000641601 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
SAMMSON-218ENST00000641601 ADGRL1O94910 1474 aa13.27□□□□□ -0.28
SAMMSON-218ENST00000641601 PPRC1Q5VV67 1664 aaKnown RBP13.27□□□□□ -0.29
SAMMSON-218ENST00000641601 C20orf194Q5TEA3 1177 aa13.27□□□□□ -0.29
SAMMSON-218ENST00000641601 DDRGK1Q96HY6 314 aa13.27□□□□□ -0.29
SAMMSON-218ENST00000641601 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
SAMMSON-218ENST00000641601 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
SAMMSON-218ENST00000641601 NKTRP30414 1462 aaKnown RBP13.26□□□□□ -0.29
SAMMSON-218ENST00000641601 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
SAMMSON-218ENST00000641601 ADGRB3O60242 1522 aa13.25□□□□□ -0.29
SAMMSON-218ENST00000641601 USP35Q9P2H5 1018 aa13.25□□□□□ -0.29
SAMMSON-218ENST00000641601 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
SAMMSON-218ENST00000641601 DIP2BQ9P265 1576 aa13.25□□□□□ -0.29
SAMMSON-218ENST00000641601 KIF3BO15066 747 aa13.25□□□□□ -0.29
SAMMSON-218ENST00000641601 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
SAMMSON-218ENST00000641601 POLR3AO14802 1390 aaPredicted RBP13.23□□□□□ -0.29
SAMMSON-218ENST00000641601 PPLO60437 1756 aa13.23□□□□□ -0.29
SAMMSON-218ENST00000641601 PPM1GO15355 546 aaPredicted RBP13.23□□□□□ -0.29
SAMMSON-218ENST00000641601 CFAP70Q5T0N1 1121 aa13.23□□□□□ -0.29
SAMMSON-218ENST00000641601 SHPRHQ149N8 1683 aa13.22□□□□□ -0.29
SAMMSON-218ENST00000641601 E9PSI1 815 aa13.22□□□□□ -0.29
SAMMSON-218ENST00000641601 KIF13AQ9H1H9 1805 aa13.22□□□□□ -0.29
SAMMSON-218ENST00000641601 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
SAMMSON-218ENST00000641601 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
SAMMSON-218ENST00000641601 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.29
SAMMSON-218ENST00000641601 QRICH2Q9H0J4 1663 aa13.21□□□□□ -0.29
SAMMSON-218ENST00000641601 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.3
SAMMSON-218ENST00000641601 ZNF518AQ6AHZ1 1483 aa13.21□□□□□ -0.3
SAMMSON-218ENST00000641601 APAF1O14727 1248 aa13.2□□□□□ -0.3
SAMMSON-218ENST00000641601 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
SAMMSON-218ENST00000641601 FAM161AQ3B820 660 aa13.19□□□□□ -0.3
SAMMSON-218ENST00000641601 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
SAMMSON-218ENST00000641601 TSPOAP1O95153 1857 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms