RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 SHPRHQ149N8 1683 aa13.26□□□□□ -0.29
SCARB2-226ENST00000640916 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
SCARB2-226ENST00000640916 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
SCARB2-226ENST00000640916 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
SCARB2-226ENST00000640916 NKTRP30414 1462 aaKnown RBP13.25□□□□□ -0.29
SCARB2-226ENST00000640916 ARHGAP31Q2M1Z3 1444 aa13.25□□□□□ -0.29
SCARB2-226ENST00000640916 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
SCARB2-226ENST00000640916 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
SCARB2-226ENST00000640916 SLC26A8Q96RN1 970 aa13.25□□□□□ -0.29
SCARB2-226ENST00000640916 RXRBP28702 533 aa13.24□□□□□ -0.29
SCARB2-226ENST00000640916 MSH6P52701 1360 aa13.23□□□□□ -0.29
SCARB2-226ENST00000640916 CHD2O14647 1828 aaKnown RBP13.23□□□□□ -0.29
SCARB2-226ENST00000640916 AHDC1Q5TGY3 1603 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-226ENST00000640916 DIP2AQ14689 1571 aa13.22□□□□□ -0.29
SCARB2-226ENST00000640916 TSPY4P0CV99 314 aa13.21□□□□□ -0.29
SCARB2-226ENST00000640916 TSPY10P0CW01 314 aa13.21□□□□□ -0.29
SCARB2-226ENST00000640916 EFCAB6Q5THR3 1501 aa13.21□□□□□ -0.29
SCARB2-226ENST00000640916 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
SCARB2-226ENST00000640916 IDI1Q13907 227 aa13.19□□□□□ -0.3
SCARB2-226ENST00000640916 RGS12O14924 1447 aa13.19□□□□□ -0.3
SCARB2-226ENST00000640916 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-226ENST00000640916 AFF2P51816 1311 aa13.16□□□□□ -0.3
SCARB2-226ENST00000640916 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
SCARB2-226ENST00000640916 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
SCARB2-226ENST00000640916 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
SCARB2-226ENST00000640916 MYO5BQ9ULV0 1848 aa13.14□□□□□ -0.31
SCARB2-226ENST00000640916 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
SCARB2-226ENST00000640916 ADGRB3O60242 1522 aa13.13□□□□□ -0.31
SCARB2-226ENST00000640916 NUTM2BA6NNL0 878 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-226ENST00000640916 NUTM2EB1AL46 878 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-226ENST00000640916 NUTM2AQ8IVF1 878 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-226ENST00000640916 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
SCARB2-226ENST00000640916 ZFYVE9O95405 1425 aa13.12□□□□□ -0.31
SCARB2-226ENST00000640916 NOS1P29475 1434 aa13.12□□□□□ -0.31
SCARB2-226ENST00000640916 EP400Q96L91 3159 aa13.1□□□□□ -0.31
SCARB2-226ENST00000640916 LMTK2Q8IWU2 1503 aa13.1□□□□□ -0.31
SCARB2-226ENST00000640916 RBM6P78332 1123 aaKnown RBP13.1□□□□□ -0.31
SCARB2-226ENST00000640916 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
SCARB2-226ENST00000640916 QTRT2Q9H974 415 aaKnown RBP13.1□□□□□ -0.31
SCARB2-226ENST00000640916 PLEKHG1Q9ULL1 1385 aa13.09□□□□□ -0.31
SCARB2-226ENST00000640916 ERBINQ96RT1 1412 aa13.09□□□□□ -0.31
SCARB2-226ENST00000640916 SETD5Q9C0A6 1442 aa13.09□□□□□ -0.31
SCARB2-226ENST00000640916 NHSL1Q5SYE7 1610 aa13.09□□□□□ -0.31
SCARB2-226ENST00000640916 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
SCARB2-226ENST00000640916 NUTM2DQ5VT03 806 aaPredicted RBP13.08□□□□□ -0.32
SCARB2-226ENST00000640916 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.32
SCARB2-226ENST00000640916 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
SCARB2-226ENST00000640916 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
SCARB2-226ENST00000640916 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
SCARB2-226ENST00000640916 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
SCARB2-226ENST00000640916 ADAMTS13Q76LX8 1427 aa13.06□□□□□ -0.32
SCARB2-226ENST00000640916 CROCC2H7BZ55 1655 aa13.06□□□□□ -0.32
SCARB2-226ENST00000640916 SAMD1Q6SPF0 538 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-226ENST00000640916 ASXL1Q8IXJ9 1541 aa13.06□□□□□ -0.32
SCARB2-226ENST00000640916 GCC2Q8IWJ2 1684 aa13.05□□□□□ -0.32
SCARB2-226ENST00000640916 BCANQ96GW7 911 aa13.05□□□□□ -0.32
SCARB2-226ENST00000640916 TMEM131LA2VDJ0 1609 aa13.05□□□□□ -0.32
SCARB2-226ENST00000640916 ATAD2Q6PL18 1390 aa13.05□□□□□ -0.32
SCARB2-226ENST00000640916 ATF3P18847 181 aa13.04□□□□□ -0.32
SCARB2-226ENST00000640916 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
SCARB2-226ENST00000640916 RRP7BPQ9NSQ0 103 aa13.04□□□□□ -0.32
SCARB2-226ENST00000640916 RIMS2Q9UQ26 1411 aa13.04□□□□□ -0.32
SCARB2-226ENST00000640916 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
SCARB2-226ENST00000640916 SLC52A1Q9NWF4 448 aa13.03□□□□□ -0.32
SCARB2-226ENST00000640916 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
SCARB2-226ENST00000640916 ABCC5O15440 1437 aa13.03□□□□□ -0.32
SCARB2-226ENST00000640916 MYOM3Q5VTT5 1437 aa13.03□□□□□ -0.32
SCARB2-226ENST00000640916 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
SCARB2-226ENST00000640916 DDX17Q92841 729 aaKnown RBP13.01□□□□□ -0.33
SCARB2-226ENST00000640916 KANK1Q14678 1352 aa13.01□□□□□ -0.33
SCARB2-226ENST00000640916 MST1RQ04912 1400 aa13.01□□□□□ -0.33
SCARB2-226ENST00000640916 DCCP43146 1447 aa13□□□□□ -0.33
SCARB2-226ENST00000640916 PIK3R4Q99570 1358 aa13□□□□□ -0.33
SCARB2-226ENST00000640916 LRRC59Q96AG4 307 aaKnown RBP13□□□□□ -0.33
SCARB2-226ENST00000640916 ATF5Q9Y2D1 282 aaPredicted RBP13□□□□□ -0.33
SCARB2-226ENST00000640916 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
SCARB2-226ENST00000640916 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-226ENST00000640916 LRP5O75197 1615 aa12.98□□□□□ -0.33
SCARB2-226ENST00000640916 ATRNO75882 1429 aa12.97□□□□□ -0.33
SCARB2-226ENST00000640916 XRN1Q8IZH2 1706 aaKnown RBP12.97□□□□□ -0.33
SCARB2-226ENST00000640916 AMOTL2Q9Y2J4 779 aa12.97□□□□□ -0.33
SCARB2-226ENST00000640916 TRPM2O94759 1503 aa12.97□□□□□ -0.33
SCARB2-226ENST00000640916 LAMC1P11047 1609 aa12.96□□□□□ -0.33
SCARB2-226ENST00000640916 PPP1R15AO75807 674 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-226ENST00000640916 ADAMTS2O95450 1211 aa12.96□□□□□ -0.33
SCARB2-226ENST00000640916 CCDC125Q86Z20 511 aa12.96□□□□□ -0.33
SCARB2-226ENST00000640916 FNBP4Q8N3X1 1017 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-226ENST00000640916 RPRD2Q5VT52 1461 aaKnown RBP12.96□□□□□ -0.34
SCARB2-226ENST00000640916 UNC13BO14795 1591 aa12.95□□□□□ -0.34
SCARB2-226ENST00000640916 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
SCARB2-226ENST00000640916 USP21Q9UK80 565 aa12.95□□□□□ -0.34
SCARB2-226ENST00000640916 DAPK1P53355 1430 aa12.95□□□□□ -0.34
SCARB2-226ENST00000640916 NRXN3Q9Y4C0 1643 aa12.95□□□□□ -0.34
SCARB2-226ENST00000640916 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-226ENST00000640916 TRPC5Q9UL62 973 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-226ENST00000640916 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
SCARB2-226ENST00000640916 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCARB2-226ENST00000640916 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
SCARB2-226ENST00000640916 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
SCARB2-226ENST00000640916 COL22A1Q8NFW1 1626 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms