RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 ATP7AQ04656 1500 aa18.45■□□□□ 0.54
GFAP-237ENST00000640552 CRBNQ96SW2 442 aa18.45■□□□□ 0.54
GFAP-237ENST00000640552 NOS1P29475 1434 aa18.45■□□□□ 0.54
GFAP-237ENST00000640552 AMER1Q5JTC6 1135 aaPredicted RBP18.45■□□□□ 0.54
GFAP-237ENST00000640552 COL17A1Q9UMD9 1497 aaPredicted RBP18.44■□□□□ 0.54
GFAP-237ENST00000640552 GPRASP1Q5JY77 1395 aa18.44■□□□□ 0.54
GFAP-237ENST00000640552 UHRF1BP1LA0JNW5 1464 aa18.44■□□□□ 0.54
GFAP-237ENST00000640552 MSH5O43196 834 aa18.44■□□□□ 0.54
GFAP-237ENST00000640552 NBR1Q14596 966 aa18.43■□□□□ 0.54
GFAP-237ENST00000640552 MINK1Q8N4C8 1332 aaPredicted RBP18.43■□□□□ 0.54
GFAP-237ENST00000640552 FBXO31Q5XUX0 539 aaPredicted RBP18.43■□□□□ 0.54
GFAP-237ENST00000640552 C20orf194Q5TEA3 1177 aa18.42■□□□□ 0.54
GFAP-237ENST00000640552 GOLGA2Q08379 1002 aa18.41■□□□□ 0.54
GFAP-237ENST00000640552 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
GFAP-237ENST00000640552 CARD14Q9BXL6 1004 aa18.41■□□□□ 0.54
GFAP-237ENST00000640552 ESF1Q9H501 851 aaKnown RBP18.41■□□□□ 0.54
GFAP-237ENST00000640552 TRPM1Q7Z4N2 1603 aa18.41■□□□□ 0.54
GFAP-237ENST00000640552 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
GFAP-237ENST00000640552 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
GFAP-237ENST00000640552 UNC13BO14795 1591 aa18.41■□□□□ 0.54
GFAP-237ENST00000640552 SCAF11Q99590 1463 aaKnown RBP18.4■□□□□ 0.54
GFAP-237ENST00000640552 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
GFAP-237ENST00000640552 ZFYVE16Q7Z3T8 1539 aa18.4■□□□□ 0.54
GFAP-237ENST00000640552 IDI1Q13907 227 aa18.4■□□□□ 0.54
GFAP-237ENST00000640552 IQGAP3Q86VI3 1631 aa18.4■□□□□ 0.54
GFAP-237ENST00000640552 PDE3BQ13370 1112 aa18.4■□□□□ 0.54
GFAP-237ENST00000640552 ANP32AP39687 249 aaKnown RBP18.4■□□□□ 0.54
GFAP-237ENST00000640552 PLXNC1O60486 1568 aa18.39■□□□□ 0.54
GFAP-237ENST00000640552 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.53
GFAP-237ENST00000640552 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
GFAP-237ENST00000640552 RGS3P49796 1198 aa18.37■□□□□ 0.53
GFAP-237ENST00000640552 BCL2L13Q9BXK5 485 aa18.37■□□□□ 0.53
GFAP-237ENST00000640552 VGFO15240 615 aaPredicted RBP18.36■□□□□ 0.53
GFAP-237ENST00000640552 U2AF1L5P0DN76 240 aaPredicted RBP18.36■□□□□ 0.53
GFAP-237ENST00000640552 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.53
GFAP-237ENST00000640552 MYT1Q01538 1121 aa18.35■□□□□ 0.53
GFAP-237ENST00000640552 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
GFAP-237ENST00000640552 E9PCH4 1651 aa18.35■□□□□ 0.53
GFAP-237ENST00000640552 MTHFSP49914 203 aa18.34■□□□□ 0.53
GFAP-237ENST00000640552 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
GFAP-237ENST00000640552 ZNF518AQ6AHZ1 1483 aa18.34■□□□□ 0.53
GFAP-237ENST00000640552 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
GFAP-237ENST00000640552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.33■□□□□ 0.53
GFAP-237ENST00000640552 NUTM2FA1L443 756 aa18.33■□□□□ 0.52
GFAP-237ENST00000640552 BCAR3O75815 825 aa18.33■□□□□ 0.52
GFAP-237ENST00000640552 CLTCL1P53675 1640 aa18.33■□□□□ 0.52
GFAP-237ENST00000640552 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
GFAP-237ENST00000640552 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
GFAP-237ENST00000640552 PLEKHH1Q9ULM0 1364 aa18.31■□□□□ 0.52
GFAP-237ENST00000640552 CLUAP1Q96AJ1 413 aa18.31■□□□□ 0.52
GFAP-237ENST00000640552 PRAM1Q96QH2 718 aa18.3■□□□□ 0.52
GFAP-237ENST00000640552 EIF2AK4Q9P2K8 1649 aaKnown RBP18.3■□□□□ 0.52
GFAP-237ENST00000640552 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.3■□□□□ 0.52
GFAP-237ENST00000640552 CFAP53Q96M91 514 aa18.3■□□□□ 0.52
GFAP-237ENST00000640552 C14orf93Q9H972 538 aaKnown RBP18.3■□□□□ 0.52
GFAP-237ENST00000640552 NPATQ14207 1427 aa18.29■□□□□ 0.52
GFAP-237ENST00000640552 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
GFAP-237ENST00000640552 FBLN1P23142 703 aa18.29■□□□□ 0.52
GFAP-237ENST00000640552 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
GFAP-237ENST00000640552 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
GFAP-237ENST00000640552 PTPRTO14522 1441 aa18.28■□□□□ 0.52
GFAP-237ENST00000640552 TRPM2O94759 1503 aa18.28■□□□□ 0.52
GFAP-237ENST00000640552 SLC24A1O60721 1099 aa18.27■□□□□ 0.52
GFAP-237ENST00000640552 ZBTB47Q9UFB7 747 aaPredicted RBP18.27■□□□□ 0.52
GFAP-237ENST00000640552 SOX12O15370 315 aa18.27■□□□□ 0.52
GFAP-237ENST00000640552 DUSP27Q5VZP5 1158 aa18.27■□□□□ 0.51
GFAP-237ENST00000640552 CGNL1Q0VF96 1302 aa18.26■□□□□ 0.51
GFAP-237ENST00000640552 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
GFAP-237ENST00000640552 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
GFAP-237ENST00000640552 WAPLQ7Z5K2 1190 aa18.25■□□□□ 0.51
GFAP-237ENST00000640552 TCP11L2Q8N4U5 519 aa18.25■□□□□ 0.51
GFAP-237ENST00000640552 RNF123Q5XPI4 1314 aa18.24■□□□□ 0.51
GFAP-237ENST00000640552 YEATS2Q9ULM3 1422 aa18.24■□□□□ 0.51
GFAP-237ENST00000640552 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
GFAP-237ENST00000640552 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
GFAP-237ENST00000640552 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
GFAP-237ENST00000640552 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
GFAP-237ENST00000640552 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
GFAP-237ENST00000640552 PDE4AP27815 886 aa18.22■□□□□ 0.51
GFAP-237ENST00000640552 SPHKAPQ2M3C7 1700 aa18.22■□□□□ 0.51
GFAP-237ENST00000640552 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
GFAP-237ENST00000640552 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
GFAP-237ENST00000640552 MADDQ8WXG6 1647 aa18.21■□□□□ 0.51
GFAP-237ENST00000640552 SLFN5Q08AF3 891 aa18.21■□□□□ 0.51
GFAP-237ENST00000640552 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
GFAP-237ENST00000640552 ABCA9Q8IUA7 1624 aa18.2■□□□□ 0.5
GFAP-237ENST00000640552 CABP1Q9NZU7 370 aa18.2■□□□□ 0.5
GFAP-237ENST00000640552 ERVK-7P63135 1459 aa18.19■□□□□ 0.5
GFAP-237ENST00000640552 TET3O43151 1660 aa18.19■□□□□ 0.5
GFAP-237ENST00000640552 E9PSI1 815 aa18.18■□□□□ 0.5
GFAP-237ENST00000640552 WWC1Q8IX03 1113 aa18.18■□□□□ 0.5
GFAP-237ENST00000640552 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
GFAP-237ENST00000640552 SLC52A1Q9NWF4 448 aa18.17■□□□□ 0.5
GFAP-237ENST00000640552 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
GFAP-237ENST00000640552 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
GFAP-237ENST00000640552 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
GFAP-237ENST00000640552 TXNDC2Q86VQ3 553 aa18.16■□□□□ 0.5
GFAP-237ENST00000640552 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
GFAP-237ENST00000640552 CEP152O94986 1710 aa18.16■□□□□ 0.5
GFAP-237ENST00000640552 CDK19Q9BWU1 502 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms