RNA–Protein interactions for RNA: ENST00000640523.1

KCNMA1-283, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-283ENST00000640523 ZKSCAN1P17029 563 aaPredicted RBP28.08■■■□□ 2.09
KCNMA1-283ENST00000640523 TPD52L1Q16890 204 aaPredicted RBP28.08■■■□□ 2.09
KCNMA1-283ENST00000640523 NUTM2DQ5VT03 806 aaPredicted RBP28.08■■■□□ 2.09
KCNMA1-283ENST00000640523 API5Q9BZZ5 524 aaKnown RBP28.07■■■□□ 2.08
KCNMA1-283ENST00000640523 INTS3Q68E01 1043 aaKnown RBP28.07■■■□□ 2.08
KCNMA1-283ENST00000640523 CCDC70Q6NSX1 233 aa28.07■■■□□ 2.08
KCNMA1-283ENST00000640523 HOMER1Q86YM7 354 aa28.06■■■□□ 2.08
KCNMA1-283ENST00000640523 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
KCNMA1-283ENST00000640523 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
KCNMA1-283ENST00000640523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.04■■■□□ 2.08
KCNMA1-283ENST00000640523 BICD2Q8TD16 824 aa28.04■■■□□ 2.08
KCNMA1-283ENST00000640523 PKNOX2Q96KN3 472 aa28.04■■■□□ 2.08
KCNMA1-283ENST00000640523 PES1O00541 588 aaKnown RBP28.03■■■□□ 2.08
KCNMA1-283ENST00000640523 LNPKQ9C0E8 428 aa28.03■■■□□ 2.08
KCNMA1-283ENST00000640523 IFT57Q9NWB7 429 aa28.03■■■□□ 2.08
KCNMA1-283ENST00000640523 ARGLU1Q9NWB6 273 aaPredicted RBP28.02■■■□□ 2.08
KCNMA1-283ENST00000640523 ANO2Q9NQ90 1003 aa28.02■■■□□ 2.08
KCNMA1-283ENST00000640523 BRD4O60885 1362 aaPredicted RBP28.01■■■□□ 2.07
KCNMA1-283ENST00000640523 TOMM22Q9NS69 142 aa28■■■□□ 2.07
KCNMA1-283ENST00000640523 RUSC2Q8N2Y8 1516 aa28■■■□□ 2.07
KCNMA1-283ENST00000640523 RUNDC1Q96C34 613 aa28■■■□□ 2.07
KCNMA1-283ENST00000640523 SMC3Q9UQE7 1217 aa28■■■□□ 2.07
KCNMA1-283ENST00000640523 SASS6Q6UVJ0 657 aa27.99■■■□□ 2.07
KCNMA1-283ENST00000640523 AMPHP49418 695 aa27.99■■■□□ 2.07
KCNMA1-283ENST00000640523 BACH2Q9BYV9 841 aa27.99■■■□□ 2.07
KCNMA1-283ENST00000640523 WASHC2AQ641Q2 1341 aa27.99■■■□□ 2.07
KCNMA1-283ENST00000640523 NGDNQ8NEJ9 315 aaKnown RBP27.98■■■□□ 2.07
KCNMA1-283ENST00000640523 PANK1Q8TE04 598 aa27.98■■■□□ 2.07
KCNMA1-283ENST00000640523 LTV1Q96GA3 475 aaPredicted RBP27.98■■■□□ 2.07
KCNMA1-283ENST00000640523 ROCK1Q13464 1354 aa27.97■■■□□ 2.07
KCNMA1-283ENST00000640523 CCDC173Q0VFZ6 552 aa27.97■■■□□ 2.07
KCNMA1-283ENST00000640523 CPLX2Q6PUV4 134 aaKnown RBP27.97■■■□□ 2.07
KCNMA1-283ENST00000640523 VPS37CA5D8V6 355 aaPredicted RBP27.97■■■□□ 2.07
KCNMA1-283ENST00000640523 CEP89Q96ST8 783 aa27.96■■■□□ 2.07
KCNMA1-283ENST00000640523 UACAQ9BZF9 1416 aa27.96■■■□□ 2.07
KCNMA1-283ENST00000640523 HMGN5P82970 282 aaKnown RBP27.95■■■□□ 2.07
KCNMA1-283ENST00000640523 CDC45O75419 566 aa27.95■■■□□ 2.07
KCNMA1-283ENST00000640523 MBD3O95983 291 aa27.95■■■□□ 2.07
KCNMA1-283ENST00000640523 MNS1Q8NEH6 495 aa27.95■■■□□ 2.07
KCNMA1-283ENST00000640523 IPO7O95373 1038 aaKnown RBP27.95■■■□□ 2.06
KCNMA1-283ENST00000640523 RNF214Q8ND24 703 aa27.94■■■□□ 2.06
KCNMA1-283ENST00000640523 PDE4CQ08493 712 aa27.94■■■□□ 2.06
KCNMA1-283ENST00000640523 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
KCNMA1-283ENST00000640523 EVC2Q86UK5 1308 aa27.94■■■□□ 2.06
KCNMA1-283ENST00000640523 NUTM2FA1L443 756 aa27.93■■■□□ 2.06
KCNMA1-283ENST00000640523 RIPK4P57078 832 aa27.93■■■□□ 2.06
KCNMA1-283ENST00000640523 RNF20Q5VTR2 975 aa27.93■■■□□ 2.06
KCNMA1-283ENST00000640523 TMX4Q9H1E5 349 aaPredicted RBP27.93■■■□□ 2.06
KCNMA1-283ENST00000640523 CAVIN1Q6NZI2 390 aaKnown RBP27.92■■■□□ 2.06
KCNMA1-283ENST00000640523 NOM1Q5C9Z4 860 aaKnown RBP27.91■■■□□ 2.06
KCNMA1-283ENST00000640523 WIZO95785 1651 aa27.91■■■□□ 2.06
KCNMA1-283ENST00000640523 DIAPH1O60610 1272 aaKnown RBP27.9■■■□□ 2.06
KCNMA1-283ENST00000640523 CCDC9Q9Y3X0 531 aaKnown RBP27.9■■■□□ 2.06
KCNMA1-283ENST00000640523 CCDC66A2RUB6 948 aa27.89■■■□□ 2.06
KCNMA1-283ENST00000640523 WASHC2CQ9Y4E1 1318 aa27.89■■■□□ 2.06
KCNMA1-283ENST00000640523 CCDC73Q6ZRK6 1079 aa27.89■■■□□ 2.05
KCNMA1-283ENST00000640523 ACBD3Q9H3P7 528 aa27.89■■■□□ 2.05
KCNMA1-283ENST00000640523 ANKRD20A12PQ8NF67 263 aa27.88■■■□□ 2.05
KCNMA1-283ENST00000640523 CDCA7LQ96GN5 454 aa27.88■■■□□ 2.05
KCNMA1-283ENST00000640523 AKAP17AQ02040 695 aaKnown RBP27.88■■■□□ 2.05
KCNMA1-283ENST00000640523 LRRFIP1Q32MZ4 808 aaKnown RBP27.87■■■□□ 2.05
KCNMA1-283ENST00000640523 COG3Q96JB2 828 aa27.87■■■□□ 2.05
KCNMA1-283ENST00000640523 HOOK1Q9UJC3 728 aaKnown RBP27.86■■■□□ 2.05
KCNMA1-283ENST00000640523 LETM1O95202 739 aaPredicted RBP27.86■■■□□ 2.05
KCNMA1-283ENST00000640523 ADAMTS8Q9UP79 889 aa27.86■■■□□ 2.05
KCNMA1-283ENST00000640523 SYNE3Q6ZMZ3 975 aa27.85■■■□□ 2.05
KCNMA1-283ENST00000640523 IFIT2P09913 472 aaKnown RBP27.85■■■□□ 2.05
KCNMA1-283ENST00000640523 HSP90B2PQ58FF3 399 aa27.85■■■□□ 2.05
KCNMA1-283ENST00000640523 TRIM29Q14134 588 aa27.85■■■□□ 2.05
KCNMA1-283ENST00000640523 CPLX1O14810 134 aa27.85■■■□□ 2.05
KCNMA1-283ENST00000640523 EID1Q9Y6B2 187 aa27.85■■■□□ 2.05
KCNMA1-283ENST00000640523 MIA2Q96PC5 1412 aa27.84■■■□□ 2.05
KCNMA1-283ENST00000640523 RRP9O43818 475 aaKnown RBP27.83■■■□□ 2.05
KCNMA1-283ENST00000640523 RBM10P98175 930 aaKnown RBP27.83■■■□□ 2.05
KCNMA1-283ENST00000640523 PDZRN3Q9UPQ7 1066 aa27.83■■■□□ 2.05
KCNMA1-283ENST00000640523 GNAI1P63096 354 aa27.82■■■□□ 2.04
KCNMA1-283ENST00000640523 MARCH6O60337 910 aa27.82■■■□□ 2.04
KCNMA1-283ENST00000640523 PDE3AQ14432 1141 aa27.82■■■□□ 2.04
KCNMA1-283ENST00000640523 TSPY26PQ9H489 355 aa27.82■■■□□ 2.04
KCNMA1-283ENST00000640523 GRPEL1Q9HAV7 217 aa27.81■■■□□ 2.04
KCNMA1-283ENST00000640523 C9orf78Q9NZ63 289 aaPredicted RBP27.81■■■□□ 2.04
KCNMA1-283ENST00000640523 AKNAQ7Z591 1439 aa27.8■■■□□ 2.04
KCNMA1-283ENST00000640523 PRPF40AO75400 957 aaKnown RBP27.8■■■□□ 2.04
KCNMA1-283ENST00000640523 RABEP1Q15276 862 aa27.8■■■□□ 2.04
KCNMA1-283ENST00000640523 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.8■■■□□ 2.04
KCNMA1-283ENST00000640523 CWC15Q9P013 229 aaKnown RBP27.8■■■□□ 2.04
KCNMA1-283ENST00000640523 VGFO15240 615 aaPredicted RBP27.79■■■□□ 2.04
KCNMA1-283ENST00000640523 FGD6Q6ZV73 1430 aa27.79■■■□□ 2.04
KCNMA1-283ENST00000640523 G3V3G9 751 aa27.79■■■□□ 2.04
KCNMA1-283ENST00000640523 DCAF8Q5TAQ9 597 aa27.79■■■□□ 2.04
KCNMA1-283ENST00000640523 NAT10Q9H0A0 1025 aaKnown RBP27.79■■■□□ 2.04
KCNMA1-283ENST00000640523 MCM2P49736 904 aa27.78■■■□□ 2.04
KCNMA1-283ENST00000640523 GTF2E1P29083 439 aaPredicted RBP27.78■■■□□ 2.04
KCNMA1-283ENST00000640523 HSP90AB4PQ58FF6 505 aa27.78■■■□□ 2.04
KCNMA1-283ENST00000640523 ESPNB1AK53 854 aa27.77■■■□□ 2.04
KCNMA1-283ENST00000640523 TRIM5Q9C035 493 aa27.77■■■□□ 2.04
KCNMA1-283ENST00000640523 NEXNQ0ZGT2 675 aa27.77■■■□□ 2.04
KCNMA1-283ENST00000640523 PDS5BQ9NTI5 1447 aa27.77■■■□□ 2.04
KCNMA1-283ENST00000640523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.76■■■□□ 2.03
KCNMA1-283ENST00000640523 AK7Q96M32 723 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms