RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 EVC2Q86UK5 1308 aa7.57□□□□□ -1.2
RTTN-218ENST00000640408 TOM1O60784 492 aa7.57□□□□□ -1.2
RTTN-218ENST00000640408 HDGFL2Q7Z4V5 671 aaPredicted RBP7.57□□□□□ -1.2
RTTN-218ENST00000640408 CENPJQ9HC77 1338 aaPredicted RBP7.56□□□□□ -1.2
RTTN-218ENST00000640408 KCNA6P17658 529 aa7.56□□□□□ -1.2
RTTN-218ENST00000640408 SRPK2P78362 688 aaKnown RBP7.56□□□□□ -1.2
RTTN-218ENST00000640408 SLC26A8Q96RN1 970 aa7.56□□□□□ -1.2
RTTN-218ENST00000640408 TERF2IPQ9NYB0 399 aa7.56□□□□□ -1.2
RTTN-218ENST00000640408 GCC2Q8IWJ2 1684 aa7.56□□□□□ -1.2
RTTN-218ENST00000640408 ABCA6Q8N139 1617 aa7.56□□□□□ -1.2
RTTN-218ENST00000640408 EFCAB6Q5THR3 1501 aa7.56□□□□□ -1.2
RTTN-218ENST00000640408 C14orf93Q9H972 538 aaKnown RBP7.56□□□□□ -1.2
RTTN-218ENST00000640408 HAP1P54257 671 aaPredicted RBP7.55□□□□□ -1.2
RTTN-218ENST00000640408 SIRT1Q96EB6 747 aa7.55□□□□□ -1.2
RTTN-218ENST00000640408 TET3O43151 1660 aa7.55□□□□□ -1.2
RTTN-218ENST00000640408 ZC3H13Q5T200 1668 aaKnown RBP7.55□□□□□ -1.2
RTTN-218ENST00000640408 FKBP8Q14318 412 aa7.55□□□□□ -1.2
RTTN-218ENST00000640408 ZBTB47Q9UFB7 747 aaPredicted RBP7.55□□□□□ -1.2
RTTN-218ENST00000640408 HSPA2P54652 639 aa7.55□□□□□ -1.2
RTTN-218ENST00000640408 NEFMP07197 916 aa7.55□□□□□ -1.2
RTTN-218ENST00000640408 NCLP19338 710 aaKnown RBP7.54□□□□□ -1.2
RTTN-218ENST00000640408 TRAK1Q9UPV9 953 aa7.54□□□□□ -1.2
RTTN-218ENST00000640408 NUTM2DQ5VT03 806 aaPredicted RBP7.54□□□□□ -1.2
RTTN-218ENST00000640408 UGGT1Q9NYU2 1555 aa7.54□□□□□ -1.2
RTTN-218ENST00000640408 CFAP70Q5T0N1 1121 aa7.54□□□□□ -1.2
RTTN-218ENST00000640408 ANP32BQ92688 251 aaKnown RBP7.54□□□□□ -1.2
RTTN-218ENST00000640408 ZFYVE9O95405 1425 aa7.54□□□□□ -1.2
RTTN-218ENST00000640408 TMC1Q8TDI8 760 aa7.54□□□□□ -1.2
RTTN-218ENST00000640408 UNC13BO14795 1591 aa7.54□□□□□ -1.2
RTTN-218ENST00000640408 CROCC2H7BZ55 1655 aa7.54□□□□□ -1.2
RTTN-218ENST00000640408 AMOTL2Q9Y2J4 779 aa7.54□□□□□ -1.2
RTTN-218ENST00000640408 RNF17Q9BXT8 1623 aaKnown RBP7.53□□□□□ -1.2
RTTN-218ENST00000640408 PLEKHG1Q9ULL1 1385 aa7.53□□□□□ -1.2
RTTN-218ENST00000640408 KDM4FA0A1W2PPD8 638 aa7.53□□□□□ -1.2
RTTN-218ENST00000640408 SCAF11Q99590 1463 aaKnown RBP7.53□□□□□ -1.2
RTTN-218ENST00000640408 MSH6P52701 1360 aa7.53□□□□□ -1.2
RTTN-218ENST00000640408 NGDNQ8NEJ9 315 aaKnown RBP7.53□□□□□ -1.2
RTTN-218ENST00000640408 NPHP4O75161 1426 aaPredicted RBP7.53□□□□□ -1.2
RTTN-218ENST00000640408 PSME1Q06323 249 aa7.53□□□□□ -1.2
RTTN-218ENST00000640408 IQGAP3Q86VI3 1631 aa7.53□□□□□ -1.2
RTTN-218ENST00000640408 C19orf44Q9H6X5 657 aa7.52□□□□□ -1.21
RTTN-218ENST00000640408 PPRC1Q5VV67 1664 aaKnown RBP7.52□□□□□ -1.21
RTTN-218ENST00000640408 FRMPD1Q5SYB0 1578 aa7.52□□□□□ -1.21
RTTN-218ENST00000640408 DEKP35659 375 aaKnown RBP7.52□□□□□ -1.21
RTTN-218ENST00000640408 PUS7Q96PZ0 661 aaKnown RBP7.52□□□□□ -1.21
RTTN-218ENST00000640408 TRPM2O94759 1503 aa7.52□□□□□ -1.21
RTTN-218ENST00000640408 PLA2R1Q13018 1463 aa7.51□□□□□ -1.21
RTTN-218ENST00000640408 KNSTRNQ9Y448 316 aa7.51□□□□□ -1.21
RTTN-218ENST00000640408 LRPPRCP42704 1394 aaKnown RBP7.51□□□□□ -1.21
RTTN-218ENST00000640408 NCKAP5LQ9HCH0 1330 aa7.51□□□□□ -1.21
RTTN-218ENST00000640408 GPRASP1Q5JY77 1395 aa7.51□□□□□ -1.21
RTTN-218ENST00000640408 ATAD2Q6PL18 1390 aa7.51□□□□□ -1.21
RTTN-218ENST00000640408 ZNF692Q9BU19 519 aaPredicted RBP7.5□□□□□ -1.21
RTTN-218ENST00000640408 SENP3Q9H4L4 574 aaPredicted RBP7.5□□□□□ -1.21
RTTN-218ENST00000640408 ABCC11Q96J66 1382 aa7.5□□□□□ -1.21
RTTN-218ENST00000640408 SAFB2Q14151 953 aaKnown RBP eCLIP7.49□□□□□ -1.21
RTTN-218ENST00000640408 ANP32CO43423 234 aa7.49□□□□□ -1.21
RTTN-218ENST00000640408 ADGRF5Q8IZF2 1346 aa7.49□□□□□ -1.21
RTTN-218ENST00000640408 SPATA31D1Q6ZQQ2 1576 aa7.49□□□□□ -1.21
RTTN-218ENST00000640408 CCDC61Q9Y6R9 512 aa7.49□□□□□ -1.21
RTTN-218ENST00000640408 LMOD2Q6P5Q4 547 aa7.49□□□□□ -1.21
RTTN-218ENST00000640408 PRAM1Q96QH2 718 aa7.49□□□□□ -1.21
RTTN-218ENST00000640408 VWDEQ8N2E2 1590 aa7.49□□□□□ -1.21
RTTN-218ENST00000640408 BCORL1Q5H9F3 1711 aa7.48□□□□□ -1.21
RTTN-218ENST00000640408 TMEM132EQ6IEE7 984 aa7.48□□□□□ -1.21
RTTN-218ENST00000640408 TRIM44Q96DX7 344 aaPredicted RBP7.48□□□□□ -1.21
RTTN-218ENST00000640408 MINK1Q8N4C8 1332 aaPredicted RBP7.48□□□□□ -1.21
RTTN-218ENST00000640408 CFAP53Q96M91 514 aa7.48□□□□□ -1.21
RTTN-218ENST00000640408 USP47Q96K76 1375 aa7.48□□□□□ -1.21
RTTN-218ENST00000640408 CDK11BP21127 795 aaKnown RBP7.48□□□□□ -1.21
RTTN-218ENST00000640408 LTKP29376 864 aa7.48□□□□□ -1.21
RTTN-218ENST00000640408 UBAP1LF5GYI3 381 aa7.47□□□□□ -1.21
RTTN-218ENST00000640408 MADDQ8WXG6 1647 aa7.47□□□□□ -1.21
RTTN-218ENST00000640408 ST20-MTHFSA0A0A6YYL1 179 aa7.47□□□□□ -1.21
RTTN-218ENST00000640408 SPATA31E1Q6ZUB1 1445 aa7.47□□□□□ -1.21
RTTN-218ENST00000640408 ADGRB3O60242 1522 aa7.47□□□□□ -1.21
RTTN-218ENST00000640408 RIMS1Q86UR5 1692 aaKnown RBP7.47□□□□□ -1.21
RTTN-218ENST00000640408 MROH2AA6NES4 1674 aa7.47□□□□□ -1.21
RTTN-218ENST00000640408 MYOM2P54296 1465 aa7.46□□□□□ -1.21
RTTN-218ENST00000640408 NINLQ9Y2I6 1382 aa7.46□□□□□ -1.21
RTTN-218ENST00000640408 FER1L4A9Z1Z3 1794 aa7.46□□□□□ -1.21
RTTN-218ENST00000640408 LMTK3Q96Q04 1460 aa7.46□□□□□ -1.22
RTTN-218ENST00000640408 HSPA5P11021 654 aaKnown RBP7.46□□□□□ -1.22
RTTN-218ENST00000640408 NPM2Q86SE8 214 aaKnown RBP7.46□□□□□ -1.22
RTTN-218ENST00000640408 RTN4Q9NQC3 1192 aaKnown RBP7.46□□□□□ -1.22
RTTN-218ENST00000640408 NPHP3Q7Z494 1330 aa7.46□□□□□ -1.22
RTTN-218ENST00000640408 DEPDC5O75140 1603 aa7.46□□□□□ -1.22
RTTN-218ENST00000640408 CAMSAP1Q5T5Y3 1602 aa7.46□□□□□ -1.22
RTTN-218ENST00000640408 NCOA3Q9Y6Q9 1424 aa7.45□□□□□ -1.22
RTTN-218ENST00000640408 NAP1L5Q96NT1 182 aaPredicted RBP7.45□□□□□ -1.22
RTTN-218ENST00000640408 CLTCQ00610 1675 aaKnown RBP7.45□□□□□ -1.22
RTTN-218ENST00000640408 CEP170BQ9Y4F5 1589 aaPredicted RBP7.45□□□□□ -1.22
RTTN-218ENST00000640408 WASLO00401 505 aaPredicted RBP7.45□□□□□ -1.22
RTTN-218ENST00000640408 NUDCQ9Y266 331 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 PRAG1Q86YV5 1406 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 PPM1GO15355 546 aaPredicted RBP7.44□□□□□ -1.22
RTTN-218ENST00000640408 PODXL2Q9NZ53 605 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 PHF8Q9UPP1 1060 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 YTHDC2Q9H6S0 1430 aaKnown RBP7.44□□□□□ -1.22
RTTN-218ENST00000640408 PAK3O75914 559 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms