RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 EYA1Q99502 592 aa7.55□□□□□ -1.2
ATM-230ENST00000640388 IRF6O14896 467 aa7.54□□□□□ -1.2
ATM-230ENST00000640388 OATP04181 439 aa7.54□□□□□ -1.2
ATM-230ENST00000640388 NECTIN2Q92692 538 aa7.54□□□□□ -1.2
ATM-230ENST00000640388 MINK1Q8N4C8 1332 aaPredicted RBP7.53□□□□□ -1.2
ATM-230ENST00000640388 LAPTM4AQ15012 233 aa7.53□□□□□ -1.2
ATM-230ENST00000640388 IL21Q9HBE4 155 aa7.53□□□□□ -1.2
ATM-230ENST00000640388 METTL3Q86U44 580 aaKnown RBP7.52□□□□□ -1.21
ATM-230ENST00000640388 PXYLP1Q8TE99 480 aa7.52□□□□□ -1.21
ATM-230ENST00000640388 MTRQ99707 1265 aa7.52□□□□□ -1.21
ATM-230ENST00000640388 HDGFP51858 240 aaKnown RBP7.51□□□□□ -1.21
ATM-230ENST00000640388 RCCD1A6NED2 376 aa7.5□□□□□ -1.21
ATM-230ENST00000640388 DNAJB2P25686 324 aa7.5□□□□□ -1.21
ATM-230ENST00000640388 CCDC102AQ96A19 550 aa7.5□□□□□ -1.21
ATM-230ENST00000640388 TPRNQ4KMQ1 711 aa7.49□□□□□ -1.21
ATM-230ENST00000640388 NLRP7Q8WX94 980 aa7.49□□□□□ -1.21
ATM-230ENST00000640388 PHOX2BQ99453 314 aa7.49□□□□□ -1.21
ATM-230ENST00000640388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.48□□□□□ -1.21
ATM-230ENST00000640388 APLP1P51693 650 aa7.48□□□□□ -1.21
ATM-230ENST00000640388 SWT1Q5T5J6 900 aaKnown RBP7.48□□□□□ -1.21
ATM-230ENST00000640388 SLC24A3Q9HC58 644 aa7.48□□□□□ -1.21
ATM-230ENST00000640388 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
ATM-230ENST00000640388 RNF40O75150 1001 aa7.47□□□□□ -1.21
ATM-230ENST00000640388 SLF2Q8IX21 1173 aa7.47□□□□□ -1.21
ATM-230ENST00000640388 TMEM134Q9H6X4 195 aa7.47□□□□□ -1.21
ATM-230ENST00000640388 Q6ZNB5 142 aa7.46□□□□□ -1.22
ATM-230ENST00000640388 AK7Q96M32 723 aa7.46□□□□□ -1.22
ATM-230ENST00000640388 PPP1R18Q6NYC8 613 aa7.45□□□□□ -1.22
ATM-230ENST00000640388 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.45□□□□□ -1.22
ATM-230ENST00000640388 SLC4A3P48751 1232 aa7.44□□□□□ -1.22
ATM-230ENST00000640388 ZNF516Q92618 1163 aa7.44□□□□□ -1.22
ATM-230ENST00000640388 PRR14Q9BWN1 585 aa7.44□□□□□ -1.22
ATM-230ENST00000640388 PRKD2Q9BZL6 878 aa7.44□□□□□ -1.22
ATM-230ENST00000640388 TRIM66O15016 1216 aa7.43□□□□□ -1.22
ATM-230ENST00000640388 MDM2Q00987 491 aaPredicted RBP7.43□□□□□ -1.22
ATM-230ENST00000640388 DAXXQ9UER7 740 aaPredicted RBP7.43□□□□□ -1.22
ATM-230ENST00000640388 NRG2O14511 850 aaPredicted RBP7.42□□□□□ -1.22
ATM-230ENST00000640388 LCE2BO14633 110 aa7.42□□□□□ -1.22
ATM-230ENST00000640388 PRKCSHP14314 528 aaPredicted RBP7.42□□□□□ -1.22
ATM-230ENST00000640388 TMUB1Q9BVT8 246 aa7.42□□□□□ -1.22
ATM-230ENST00000640388 DDX11L8A8MPP1 907 aa7.4□□□□□ -1.22
ATM-230ENST00000640388 GFRA3O60609 400 aa7.4□□□□□ -1.22
ATM-230ENST00000640388 CLCN1P35523 988 aa7.4□□□□□ -1.22
ATM-230ENST00000640388 GGCXP38435 758 aa7.4□□□□□ -1.22
ATM-230ENST00000640388 TTLL12Q14166 644 aaPredicted RBP7.4□□□□□ -1.22
ATM-230ENST00000640388 ZPR1O75312 459 aa7.39□□□□□ -1.23
ATM-230ENST00000640388 AMHR2Q16671 573 aa7.39□□□□□ -1.23
ATM-230ENST00000640388 RSPH4AQ5TD94 716 aa7.39□□□□□ -1.23
ATM-230ENST00000640388 RDH13Q8NBN7 331 aa7.39□□□□□ -1.23
ATM-230ENST00000640388 REPIN1Q9BWE0 567 aaKnown RBP7.39□□□□□ -1.23
ATM-230ENST00000640388 GPCPD1Q9NPB8 672 aa7.39□□□□□ -1.23
ATM-230ENST00000640388 SLC10A3P09131 477 aa7.38□□□□□ -1.23
ATM-230ENST00000640388 PDE4DQ08499 809 aa7.38□□□□□ -1.23
ATM-230ENST00000640388 TRAF7Q6Q0C0 670 aa7.38□□□□□ -1.23
ATM-230ENST00000640388 SULF1Q8IWU6 871 aa7.38□□□□□ -1.23
ATM-230ENST00000640388 NKX2-3Q8TAU0 364 aa7.38□□□□□ -1.23
ATM-230ENST00000640388 PCDHB3Q9Y5E6 796 aa7.37□□□□□ -1.23
ATM-230ENST00000640388 CFHP08603 1231 aa7.36□□□□□ -1.23
ATM-230ENST00000640388 COPS2P61201 443 aa7.36□□□□□ -1.23
ATM-230ENST00000640388 GIGYF2Q6Y7W6 1299 aaKnown RBP7.36□□□□□ -1.23
ATM-230ENST00000640388 PARP9Q8IXQ6 854 aa7.36□□□□□ -1.23
ATM-230ENST00000640388 FAM217BQ9NTX9 383 aaPredicted RBP7.36□□□□□ -1.23
ATM-230ENST00000640388 SSTR3P32745 418 aaPredicted RBP7.35□□□□□ -1.23
ATM-230ENST00000640388 ACTN4O43707 911 aaKnown RBP7.34□□□□□ -1.23
ATM-230ENST00000640388 KMT5BQ4FZB7 885 aa7.34□□□□□ -1.23
ATM-230ENST00000640388 BLOC1S3Q6QNY0 202 aa7.34□□□□□ -1.23
ATM-230ENST00000640388 CD46P15529 392 aa7.33□□□□□ -1.24
ATM-230ENST00000640388 GCGRP47871 477 aa7.32□□□□□ -1.24
ATM-230ENST00000640388 RNF223E7ERA6 249 aa7.31□□□□□ -1.24
ATM-230ENST00000640388 ANKLE1Q8NAG6 615 aa7.31□□□□□ -1.24
ATM-230ENST00000640388 GPBP1L1Q9HC44 474 aaPredicted RBP7.31□□□□□ -1.24
ATM-230ENST00000640388 PDZRN3Q9UPQ7 1066 aa7.31□□□□□ -1.24
ATM-230ENST00000640388 MS4A1P11836 297 aa7.3□□□□□ -1.24
ATM-230ENST00000640388 EMID1Q96A84 441 aaPredicted RBP7.3□□□□□ -1.24
ATM-230ENST00000640388 FUT2Q10981 343 aa7.29□□□□□ -1.24
ATM-230ENST00000640388 BEGAINQ9BUH8 593 aa7.29□□□□□ -1.24
ATM-230ENST00000640388 TLL1O43897 1013 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 KDM4AO75164 1064 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 ADH1BP00325 375 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 SLC19A1P41440 591 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 PRR20EP86478 221 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 PRR20CP86479 221 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 PRR20DP86480 221 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 PRR20BP86481 221 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 PRR20AP86496 221 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 NEUROD2Q15784 382 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 PUS10Q3MIT2 529 aaKnown RBP7.28□□□□□ -1.24
ATM-230ENST00000640388 TRIM67Q6ZTA4 783 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 NUTM1Q86Y26 1132 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 KDM4CQ9H3R0 1056 aa7.28□□□□□ -1.24
ATM-230ENST00000640388 NR1I2O75469 434 aa7.27□□□□□ -1.25
ATM-230ENST00000640388 ATP6V1AP38606 617 aa7.27□□□□□ -1.25
ATM-230ENST00000640388 SPRYD7Q5W111 196 aa7.27□□□□□ -1.25
ATM-230ENST00000640388 BRPF1P55201 1214 aaPredicted RBP7.26□□□□□ -1.25
ATM-230ENST00000640388 GRIPAP1Q4V328 841 aa7.26□□□□□ -1.25
ATM-230ENST00000640388 ZNF598Q86UK7 904 aaKnown RBP7.26□□□□□ -1.25
ATM-230ENST00000640388 S1PR4O95977 384 aa7.25□□□□□ -1.25
ATM-230ENST00000640388 SPIRE2Q8WWL2 714 aa7.25□□□□□ -1.25
ATM-230ENST00000640388 USP46P62068 366 aa7.24□□□□□ -1.25
ATM-230ENST00000640388 MORN1Q5T089 497 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms