RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 ERVK-7P63135 1459 aa30.25■■■□□ 2.43
SCARB2-212ENST00000638663 ESF1Q9H501 851 aaKnown RBP30.22■■■□□ 2.43
SCARB2-212ENST00000638663 RPGRIP1LQ68CZ1 1315 aa30.2■■■□□ 2.43
SCARB2-212ENST00000638663 PPLO60437 1756 aa30.2■■■□□ 2.43
SCARB2-212ENST00000638663 NRXN1Q9ULB1 1477 aa30.2■■■□□ 2.42
SCARB2-212ENST00000638663 ANP32CO43423 234 aa30.19■■■□□ 2.42
SCARB2-212ENST00000638663 POLR3GLQ9BT43 218 aa30.19■■■□□ 2.42
SCARB2-212ENST00000638663 KIAA1210Q9ULL0 1709 aa30.18■■■□□ 2.42
SCARB2-212ENST00000638663 CFAP70Q5T0N1 1121 aa30.18■■■□□ 2.42
SCARB2-212ENST00000638663 SPATA31D1Q6ZQQ2 1576 aa30.14■■■□□ 2.42
SCARB2-212ENST00000638663 ZMYM3Q14202 1370 aa30.14■■■□□ 2.42
SCARB2-212ENST00000638663 YTHDC1Q96MU7 727 aaKnown RBP30.13■■■□□ 2.41
SCARB2-212ENST00000638663 IQGAP1P46940 1657 aa30.12■■■□□ 2.41
SCARB2-212ENST00000638663 TMEM131LA2VDJ0 1609 aa30.12■■■□□ 2.41
SCARB2-212ENST00000638663 NEXMIFQ5QGS0 1516 aa30.12■■■□□ 2.41
SCARB2-212ENST00000638663 NUTM2DQ5VT03 806 aaPredicted RBP30.11■■■□□ 2.41
SCARB2-212ENST00000638663 SCAF11Q99590 1463 aaKnown RBP30.11■■■□□ 2.41
SCARB2-212ENST00000638663 PIK3C2GO75747 1445 aa30.11■■■□□ 2.41
SCARB2-212ENST00000638663 MYO5BQ9ULV0 1848 aa30.1■■■□□ 2.41
SCARB2-212ENST00000638663 TESK2Q96S53 571 aa30.1■■■□□ 2.41
SCARB2-212ENST00000638663 VGFO15240 615 aaPredicted RBP30.08■■■□□ 2.41
SCARB2-212ENST00000638663 STAG3Q9UJ98 1225 aa30.06■■■□□ 2.4
SCARB2-212ENST00000638663 C14orf93Q9H972 538 aaKnown RBP30.04■■■□□ 2.4
SCARB2-212ENST00000638663 EIF3AQ14152 1382 aaKnown RBP30.01■■■□□ 2.4
SCARB2-212ENST00000638663 DISP3Q9P2K9 1392 aa30.01■■■□□ 2.4
SCARB2-212ENST00000638663 SETBP1Q9Y6X0 1596 aa30■■■□□ 2.39
SCARB2-212ENST00000638663 ZFYVE9O95405 1425 aa30■■■□□ 2.39
SCARB2-212ENST00000638663 TMF1P82094 1093 aa29.99■■■□□ 2.39
SCARB2-212ENST00000638663 CCER2I3L3R5 266 aa29.98■■■□□ 2.39
SCARB2-212ENST00000638663 A2ML1A8K2U0 1454 aa29.97■■■□□ 2.39
SCARB2-212ENST00000638663 TNRQ92752 1358 aa29.96■■■□□ 2.39
SCARB2-212ENST00000638663 ADGRB1O14514 1584 aa29.95■■■□□ 2.39
SCARB2-212ENST00000638663 TMEM132EQ6IEE7 984 aa29.94■■■□□ 2.38
SCARB2-212ENST00000638663 SENP3Q9H4L4 574 aaPredicted RBP29.93■■■□□ 2.38
SCARB2-212ENST00000638663 CENPBP07199 599 aaPredicted RBP29.92■■■□□ 2.38
SCARB2-212ENST00000638663 CEBPAP49715 358 aaPredicted RBP29.9■■■□□ 2.38
SCARB2-212ENST00000638663 PRKRIP1Q9H875 184 aaPredicted RBP29.9■■■□□ 2.38
SCARB2-212ENST00000638663 TRAK1Q9UPV9 953 aa29.9■■■□□ 2.38
SCARB2-212ENST00000638663 FER1L4A9Z1Z3 1794 aa29.89■■■□□ 2.38
SCARB2-212ENST00000638663 RIMS2Q9UQ26 1411 aa29.87■■■□□ 2.37
SCARB2-212ENST00000638663 C3P01024 1663 aa29.84■■■□□ 2.37
SCARB2-212ENST00000638663 MYO3AQ8NEV4 1616 aa29.84■■■□□ 2.37
SCARB2-212ENST00000638663 PLPPR3Q6T4P5 718 aa29.84■■■□□ 2.37
SCARB2-212ENST00000638663 CENPJQ9HC77 1338 aaPredicted RBP29.83■■■□□ 2.37
SCARB2-212ENST00000638663 CNGB1Q14028 1251 aaPredicted RBP29.82■■■□□ 2.36
SCARB2-212ENST00000638663 CDCA8Q53HL2 280 aa29.82■■■□□ 2.36
SCARB2-212ENST00000638663 ASXL1Q8IXJ9 1541 aa29.8■■■□□ 2.36
SCARB2-212ENST00000638663 SLC24A1O60721 1099 aa29.79■■■□□ 2.36
SCARB2-212ENST00000638663 ALKQ9UM73 1620 aa29.78■■■□□ 2.36
SCARB2-212ENST00000638663 UBR1Q8IWV7 1749 aa29.77■■■□□ 2.36
SCARB2-212ENST00000638663 SBNO2Q9Y2G9 1366 aa29.77■■■□□ 2.36
SCARB2-212ENST00000638663 NLRP1Q9C000 1473 aa29.77■■■□□ 2.36
SCARB2-212ENST00000638663 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.77■■■□□ 2.36
SCARB2-212ENST00000638663 KDM5AP29375 1690 aaKnown RBP29.76■■■□□ 2.35
SCARB2-212ENST00000638663 PANK3Q9H999 370 aa29.75■■■□□ 2.35
SCARB2-212ENST00000638663 QRICH2Q9H0J4 1663 aa29.75■■■□□ 2.35
SCARB2-212ENST00000638663 STK26Q9P289 416 aa29.75■■■□□ 2.35
SCARB2-212ENST00000638663 ARHGEF28Q8N1W1 1705 aaKnown RBP29.74■■■□□ 2.35
SCARB2-212ENST00000638663 TMEM2Q9UHN6 1383 aa29.72■■■□□ 2.35
SCARB2-212ENST00000638663 CCDC184Q52MB2 194 aa29.72■■■□□ 2.35
SCARB2-212ENST00000638663 PER1O15534 1290 aaPredicted RBP29.71■■■□□ 2.35
SCARB2-212ENST00000638663 HDGFP51858 240 aaKnown RBP29.71■■■□□ 2.35
SCARB2-212ENST00000638663 YTHDC2Q9H6S0 1430 aaKnown RBP29.7■■■□□ 2.35
SCARB2-212ENST00000638663 PTPRMP28827 1452 aa29.68■■■□□ 2.34
SCARB2-212ENST00000638663 RIMS1Q86UR5 1692 aaKnown RBP29.67■■■□□ 2.34
SCARB2-212ENST00000638663 MYOM1P52179 1685 aa29.66■■■□□ 2.34
SCARB2-212ENST00000638663 NRXN3Q9Y4C0 1643 aa29.65■■■□□ 2.34
SCARB2-212ENST00000638663 MRS2Q9HD23 443 aa29.65■■■□□ 2.34
SCARB2-212ENST00000638663 SETD1AO15047 1707 aaKnown RBP29.64■■■□□ 2.34
SCARB2-212ENST00000638663 SAFB2Q14151 953 aaKnown RBP eCLIP29.64■■■□□ 2.34
SCARB2-212ENST00000638663 KTN1Q86UP2 1357 aaKnown RBP29.62■■■□□ 2.33
SCARB2-212ENST00000638663 ADAMTSL3P82987 1691 aa29.61■■■□□ 2.33
SCARB2-212ENST00000638663 RALBP1Q15311 655 aa29.61■■■□□ 2.33
SCARB2-212ENST00000638663 BCANQ96GW7 911 aa29.61■■■□□ 2.33
SCARB2-212ENST00000638663 PRAM1Q96QH2 718 aa29.6■■■□□ 2.33
SCARB2-212ENST00000638663 LTKP29376 864 aa29.59■■■□□ 2.33
SCARB2-212ENST00000638663 POGKQ9P215 609 aa29.59■■■□□ 2.33
SCARB2-212ENST00000638663 EVC2Q86UK5 1308 aa29.58■■■□□ 2.33
SCARB2-212ENST00000638663 CC2D1BQ5T0F9 858 aaKnown RBP29.57■■■□□ 2.32
SCARB2-212ENST00000638663 LRPPRCP42704 1394 aaKnown RBP29.57■■■□□ 2.32
SCARB2-212ENST00000638663 TXNDC2Q86VQ3 553 aa29.57■■■□□ 2.32
SCARB2-212ENST00000638663 KNSTRNQ9Y448 316 aa29.57■■■□□ 2.32
SCARB2-212ENST00000638663 METP08581 1390 aa29.57■■■□□ 2.32
SCARB2-212ENST00000638663 TULP4Q9NRJ4 1543 aa29.57■■■□□ 2.32
SCARB2-212ENST00000638663 PARD3Q8TEW0 1356 aa29.56■■■□□ 2.32
SCARB2-212ENST00000638663 MYBBP1AQ9BQG0 1328 aaKnown RBP29.55■■■□□ 2.32
SCARB2-212ENST00000638663 THEMISQ8N1K5 641 aaPredicted RBP29.54■■■□□ 2.32
SCARB2-212ENST00000638663 EID1Q9Y6B2 187 aa29.54■■■□□ 2.32
SCARB2-212ENST00000638663 SLIT1O75093 1534 aa29.54■■■□□ 2.32
SCARB2-212ENST00000638663 PLEKHG1Q9ULL1 1385 aa29.54■■■□□ 2.32
SCARB2-212ENST00000638663 ARHGAP23Q9P227 1491 aa29.53■■■□□ 2.32
SCARB2-212ENST00000638663 DLC1Q96QB1 1528 aa29.53■■■□□ 2.32
SCARB2-212ENST00000638663 ABCC11Q96J66 1382 aa29.52■■■□□ 2.32
SCARB2-212ENST00000638663 MINK1Q8N4C8 1332 aaPredicted RBP29.52■■■□□ 2.32
SCARB2-212ENST00000638663 FAM9BQ8IZU0 186 aa29.51■■■□□ 2.32
SCARB2-212ENST00000638663 TMC1Q8TDI8 760 aa29.51■■■□□ 2.31
SCARB2-212ENST00000638663 ADAMTS13Q76LX8 1427 aa29.5■■■□□ 2.31
SCARB2-212ENST00000638663 PUS7Q96PZ0 661 aaKnown RBP29.49■■■□□ 2.31
SCARB2-212ENST00000638663 CABP2Q9NPB3 220 aa29.49■■■□□ 2.31
SCARB2-212ENST00000638663 CEP170BQ9Y4F5 1589 aaPredicted RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms