RNA–Protein interactions for RNA: ENST00000638334.1

NECAP1-211, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-211ENST00000638334 PIK3C2GO75747 1445 aa13.72□□□□□ -0.21
NECAP1-211ENST00000638334 MAP3K4Q9Y6R4 1608 aa13.72□□□□□ -0.21
NECAP1-211ENST00000638334 MYO3AQ8NEV4 1616 aa13.71□□□□□ -0.22
NECAP1-211ENST00000638334 KIF1BO60333 1816 aa13.71□□□□□ -0.22
NECAP1-211ENST00000638334 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
NECAP1-211ENST00000638334 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
NECAP1-211ENST00000638334 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
NECAP1-211ENST00000638334 NEO1Q92859 1461 aa13.69□□□□□ -0.22
NECAP1-211ENST00000638334 PUS7Q96PZ0 661 aaKnown RBP13.69□□□□□ -0.22
NECAP1-211ENST00000638334 PANK3Q9H999 370 aa13.69□□□□□ -0.22
NECAP1-211ENST00000638334 KNSTRNQ9Y448 316 aa13.69□□□□□ -0.22
NECAP1-211ENST00000638334 IFT172Q9UG01 1749 aa13.69□□□□□ -0.22
NECAP1-211ENST00000638334 KIDINS220Q9ULH0 1771 aa13.68□□□□□ -0.22
NECAP1-211ENST00000638334 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
NECAP1-211ENST00000638334 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
NECAP1-211ENST00000638334 KDM5AP29375 1690 aaKnown RBP13.68□□□□□ -0.22
NECAP1-211ENST00000638334 POGZQ7Z3K3 1410 aa13.67□□□□□ -0.22
NECAP1-211ENST00000638334 ADGRB3O60242 1522 aa13.66□□□□□ -0.22
NECAP1-211ENST00000638334 KIF3BO15066 747 aa13.65□□□□□ -0.22
NECAP1-211ENST00000638334 RRP1P56182 461 aaKnown RBP13.65□□□□□ -0.22
NECAP1-211ENST00000638334 CCDC136Q96JN2 1154 aa13.65□□□□□ -0.22
NECAP1-211ENST00000638334 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
NECAP1-211ENST00000638334 HECW2Q9P2P5 1572 aa13.65□□□□□ -0.22
NECAP1-211ENST00000638334 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
NECAP1-211ENST00000638334 IRX6P78412 446 aaPredicted RBP13.63□□□□□ -0.23
NECAP1-211ENST00000638334 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
NECAP1-211ENST00000638334 ARHGAP31Q2M1Z3 1444 aa13.63□□□□□ -0.23
NECAP1-211ENST00000638334 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
NECAP1-211ENST00000638334 ABCA6Q8N139 1617 aa13.62□□□□□ -0.23
NECAP1-211ENST00000638334 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
NECAP1-211ENST00000638334 ZC3H13Q5T200 1668 aaKnown RBP13.62□□□□□ -0.23
NECAP1-211ENST00000638334 MYOM1P52179 1685 aa13.61□□□□□ -0.23
NECAP1-211ENST00000638334 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
NECAP1-211ENST00000638334 B4GALNT3Q6L9W6 998 aa13.61□□□□□ -0.23
NECAP1-211ENST00000638334 ZFYVE9O95405 1425 aa13.59□□□□□ -0.23
NECAP1-211ENST00000638334 TCERG1O14776 1098 aaKnown RBP13.59□□□□□ -0.23
NECAP1-211ENST00000638334 MS4A1P11836 297 aa13.59□□□□□ -0.23
NECAP1-211ENST00000638334 PPP2R1AP30153 589 aa13.59□□□□□ -0.23
NECAP1-211ENST00000638334 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
NECAP1-211ENST00000638334 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
NECAP1-211ENST00000638334 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
NECAP1-211ENST00000638334 NOS1P29475 1434 aa13.57□□□□□ -0.24
NECAP1-211ENST00000638334 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
NECAP1-211ENST00000638334 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.57□□□□□ -0.24
NECAP1-211ENST00000638334 ABCC3O15438 1527 aa13.57□□□□□ -0.24
NECAP1-211ENST00000638334 PPLO60437 1756 aa13.57□□□□□ -0.24
NECAP1-211ENST00000638334 FRMPD1Q5SYB0 1578 aa13.57□□□□□ -0.24
NECAP1-211ENST00000638334 ZNF521Q96K83 1311 aa13.56□□□□□ -0.24
NECAP1-211ENST00000638334 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
NECAP1-211ENST00000638334 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
NECAP1-211ENST00000638334 NPATQ14207 1427 aa13.56□□□□□ -0.24
NECAP1-211ENST00000638334 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
NECAP1-211ENST00000638334 POLR3AO14802 1390 aaPredicted RBP13.55□□□□□ -0.24
NECAP1-211ENST00000638334 NSD2O96028 1365 aa13.55□□□□□ -0.24
NECAP1-211ENST00000638334 GLI2P10070 1586 aa13.54□□□□□ -0.24
NECAP1-211ENST00000638334 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
NECAP1-211ENST00000638334 MROH2AA6NES4 1674 aa13.53□□□□□ -0.24
NECAP1-211ENST00000638334 ERICH6Q7L0X2 663 aa13.53□□□□□ -0.24
NECAP1-211ENST00000638334 ADGRB1O14514 1584 aa13.53□□□□□ -0.24
NECAP1-211ENST00000638334 CAMSAP1Q5T5Y3 1602 aa13.53□□□□□ -0.24
NECAP1-211ENST00000638334 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
NECAP1-211ENST00000638334 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
NECAP1-211ENST00000638334 SLC52A1Q9NWF4 448 aa13.52□□□□□ -0.25
NECAP1-211ENST00000638334 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
NECAP1-211ENST00000638334 ADGRF5Q8IZF2 1346 aa13.51□□□□□ -0.25
NECAP1-211ENST00000638334 ANP32AP39687 249 aaKnown RBP13.51□□□□□ -0.25
NECAP1-211ENST00000638334 AAMPQ13685 434 aa13.51□□□□□ -0.25
NECAP1-211ENST00000638334 ADAMTS8Q9UP79 889 aa13.51□□□□□ -0.25
NECAP1-211ENST00000638334 CFAP70Q5T0N1 1121 aa13.5□□□□□ -0.25
NECAP1-211ENST00000638334 TRMT2AQ8IZ69 625 aaKnown RBP13.5□□□□□ -0.25
NECAP1-211ENST00000638334 DIP2CQ9Y2E4 1556 aa13.49□□□□□ -0.25
NECAP1-211ENST00000638334 CNGB1Q14028 1251 aaPredicted RBP13.49□□□□□ -0.25
NECAP1-211ENST00000638334 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
NECAP1-211ENST00000638334 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
NECAP1-211ENST00000638334 E9PSI1 815 aa13.48□□□□□ -0.25
NECAP1-211ENST00000638334 QRICH2Q9H0J4 1663 aa13.47□□□□□ -0.25
NECAP1-211ENST00000638334 SLFN5Q08AF3 891 aa13.47□□□□□ -0.25
NECAP1-211ENST00000638334 DUSP27Q5VZP5 1158 aa13.47□□□□□ -0.25
NECAP1-211ENST00000638334 NKTRP30414 1462 aaKnown RBP13.47□□□□□ -0.25
NECAP1-211ENST00000638334 RICTORQ6R327 1708 aa13.47□□□□□ -0.25
NECAP1-211ENST00000638334 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.25
NECAP1-211ENST00000638334 NEXMIFQ5QGS0 1516 aa13.46□□□□□ -0.25
NECAP1-211ENST00000638334 EVC2Q86UK5 1308 aa13.45□□□□□ -0.26
NECAP1-211ENST00000638334 MSH5O43196 834 aa13.45□□□□□ -0.26
NECAP1-211ENST00000638334 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
NECAP1-211ENST00000638334 PLEKHH1Q9ULM0 1364 aa13.45□□□□□ -0.26
NECAP1-211ENST00000638334 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
NECAP1-211ENST00000638334 CDCA7LQ96GN5 454 aa13.44□□□□□ -0.26
NECAP1-211ENST00000638334 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
NECAP1-211ENST00000638334 ANKRD36BQ8N2N9 1353 aa13.44□□□□□ -0.26
NECAP1-211ENST00000638334 MED14O60244 1454 aa13.43□□□□□ -0.26
NECAP1-211ENST00000638334 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
NECAP1-211ENST00000638334 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
NECAP1-211ENST00000638334 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
NECAP1-211ENST00000638334 AGLP35573 1532 aa13.43□□□□□ -0.26
NECAP1-211ENST00000638334 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
NECAP1-211ENST00000638334 PDE3AQ14432 1141 aa13.41□□□□□ -0.26
NECAP1-211ENST00000638334 CARD14Q9BXL6 1004 aa13.41□□□□□ -0.26
NECAP1-211ENST00000638334 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
NECAP1-211ENST00000638334 NSD3Q9BZ95 1437 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms